4.4 Article

A Navigation Analysis Tool (NAT) to assess spatial behavior in open-field and structured mazes

Journal

JOURNAL OF NEUROSCIENCE METHODS
Volume 215, Issue 2, Pages 196-209

Publisher

ELSEVIER SCIENCE BV
DOI: 10.1016/j.jneumeth.2013.02.018

Keywords

Spatial behavior; Navigation strategies; Goal-oriented behavior; Decision point analysis; Automated statistical analysis; MATLAB analysis toolbox; MySQL relational database; JAVA graphical user interface; Open source software

Funding

  1. ANR Project EvoNeuro [ANR-09-EMER-005-01]
  2. GIS Program 'Longevity' [SRI20001117030, L0201]
  3. ACI Program 'Integrative and Computational Neuroscience' [NIC 0083]

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Spatial navigation calls upon mnemonic capabilities (e.g. remembering the location of a rewarding site) as well as adaptive motor control (e.g. fine tuning of the trajectory according to the ongoing sensory context). To study this complex process by means of behavioral measurements it is necessary to quantify a large set of meaningful parameters on multiple time scales (from milliseconds to several minutes), and to compare them across different paradigms. Moreover, the issue of automating the behavioral analysis is critical to cope with the consequent computational load and the sophistication of the measurements. We developed a general purpose Navigation Analysis Tool (NAT) that provides an integrated architecture consisting of a data management system (implemented in MySQL), a core analysis toolbox (in MATLAB), and a graphical user interface (in JAVA). Its extensive characterization of trajectories over time, from exploratory behavior to goal-oriented navigation with decision points using a wide range of parameters, makes NAT a powerful analysis tool. In particular, NAT supplies a new set of specific measurements assessing performances in multiple intersection mazes and allowing navigation strategies to be discriminated (e.g. in the starmaze). Its user interface enables easy use while its modular organization provides many opportunities of extension and customization. Importantly, the portability of NAT to any type of maze and environment extends its exploitation far beyond the field of spatial navigation. (c) 2013 Elsevier B.V. All rights reserved.

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