Make way for the ‘next generation’: application and prospects for genome-wide, epigenome-specific technologies in endocrine research

DNA methylome analysis using short bisulfite sequencing data

(2012) Felix Krueger et al.   NATURE METHODS

Identification of epigenetically silenced genes in human pancreatic cancer by a novel method “microarray coupled with methyl-CpG targeted transcriptional activation” (MeTA-array)

(2011) Hideyuki Shimizu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Genome-wide Methylation Analysis Identifies Genes Specific to Breast Cancer Hormone Receptor Status and Risk of Recurrence

(2011) M. J. Fackler et al.   CANCER RESEARCH

Infant growth restriction is associated with distinct patterns of DNA methylation in human placentas

(2011) Carolyn E. Banister et al.   Epigenetics

Quantitative, high-resolution epigenetic profiling of CpG loci identifies associations with cord blood plasma homocysteine and birth weight in humans

(2011) Anthony A. Fryer et al.   Epigenetics

High density DNA methylation array with single CpG site resolution

(2011) Marina Bibikova et al.   GENOMICS

Chromosome-wide DNA methylation analysis predicts human tissue-specific X inactivation

(2011) Allison M. Cotton et al.   HUMAN GENETICS

Genome-Wide De Novo Methylation in Epithelial Ovarian Cancer

(2011) Rachel Michaelson-Cohen et al.   INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER

The growing role of gene methylation on endocrine function

(2011) Verónica García-Carpizo et al.   JOURNAL OF MOLECULAR ENDOCRINOLOGY

Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine

(2011) Chun-Xiao Song et al.   NATURE METHODS

Recognition of 5-Hydroxymethylcytosine by the Uhrf1 SRA Domain

(2011) Carina Frauer et al.   PLoS One

Genome-wide DNA methylation profiling reveals novel epigenetically regulated genes and non-coding RNAs in human testicular cancer

(2010) H H Cheung et al.   BRITISH JOURNAL OF CANCER

Reversal of Endogenous Dopamine Receptor Silencing in Pituitary Cells Augments Receptor-Mediated Apoptosis

(2010) Haneen Al-Azzawi et al.   ENDOCRINOLOGY

Frequent promoter hypermethylation of TGFBI in epithelial ovarian cancer

(2010) Sokbom Kang et al.   GYNECOLOGIC ONCOLOGY

Epigenetics meets endocrinology

(2010) X. Zhang et al.   JOURNAL OF MOLECULAR ENDOCRINOLOGY

The Current State of Chromatin Immunoprecipitation

(2010) Philippe Collas   MOLECULAR BIOTECHNOLOGY

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications

(2010) R Alan Harris et al.   NATURE BIOTECHNOLOGY

Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution

(2010) Hongcang Gu et al.   NATURE METHODS

Principles and challenges of genome-wide DNA methylation analysis

(2010) Peter W. Laird   NATURE REVIEWS GENETICS

The Behaviour of 5-Hydroxymethylcytosine in Bisulfite Sequencing

(2010) Yun Huang et al.   PLoS One

Genetic and epigenetic regulation of aging

(2009) Mario F Fraga   CURRENT OPINION IN IMMUNOLOGY

Epigenetic Control in Pituitary Tumors

(2009) Shereen EZZAT   ENDOCRINE JOURNAL

Pituitary tumours: all silent on the epigenetics front

(2009) K J Dudley et al.   JOURNAL OF MOLECULAR ENDOCRINOLOGY

Human DNA methylomes at base resolution show widespread epigenomic differences

(2009) Ryan Lister et al.   NATURE

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

ChIP–seq: advantages and challenges of a maturing technology

(2009) Peter J. Park   NATURE REVIEWS GENETICS

MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome

(2009) David Serre et al.   NUCLEIC ACIDS RESEARCH

Genome-wide DNA methylation profiling

(2009) Marina Bibikova et al.   Wiley Interdisciplinary Reviews-Systems Biology and Medicine

Genome-Wide Analysis in a Murine Dnmt1 Knockdown Model Identifies Epigenetically Silenced Genes in Primary Human Pituitary Tumors

(2008) K. J. Dudley et al.   MOLECULAR CANCER RESEARCH

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

(2008) Shawn J. Cokus et al.   NATURE

The methylome: approaches for global DNA methylation profiling

(2008) Stephan Beck et al.   TRENDS IN GENETICS