Determining Peptide Partitioning Properties via Computer Simulation

Electrostatics of Deformable Lipid Membranes

(2010) Igor Vorobyov et al.   BIOPHYSICAL JOURNAL

Peptide Partitioning Properties from Direct Insertion Studies

(2010) Martin B. Ulmschneider et al.   BIOPHYSICAL JOURNAL

Defect-Mediated Trafficking across Cell Membranes: Insights fromin SilicoModeling

(2010) Andrey A. Gurtovenko et al.   CHEMICAL REVIEWS

Mechanism and Kinetics of Peptide Partitioning into Membranes from All-Atom Simulations of Thermostable Peptides

(2010) Martin B. Ulmschneider et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The role of lipid composition for insertion and stabilization of amino acids in membranes

(2009) Anna C. V. Johansson et al.   JOURNAL OF CHEMICAL PHYSICS

United Atom Lipid Parameters for Combination with the Optimized Potentials for Liquid Simulations All-Atom Force Field

(2009) Jakob P. Ulmschneider et al.   Journal of Chemical Theory and Computation

Peptide Partitioning and Folding into Lipid Bilayers

(2009) Jakob P. Ulmschneider et al.   Journal of Chemical Theory and Computation

Protein contents in biological membranes can explain abnormal solvation of charged and polar residues

(2009) A. C. V. Johansson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Insertion of short transmembrane helices by the Sec61 translocon

(2009) Simon Jaud et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distribution of Amino Acids in a Lipid Bilayer from Computer Simulations

(2008) Justin L. MacCallum et al.   BIOPHYSICAL JOURNAL

Ten-Microsecond Molecular Dynamics Simulation of a Fast-Folding WW Domain

(2008) Peter L. Freddolino et al.   BIOPHYSICAL JOURNAL

Membrane proteins: molecular dynamics simulations

(2008) E LINDAHL et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Folding Peptides into Lipid Bilayer Membranes

(2008) Martin B. Ulmschneider et al.   Journal of Chemical Theory and Computation

Thermodynamics of Peptide Insertion and Aggregation in a Lipid Bilayer

(2008) Arneh Babakhani et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Potential of Mean Force and pKaProfile Calculation for a Lipid Membrane-Exposed Arginine Side Chain

(2008) Libo Li et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Membrane adsorption, folding, insertion and translocation of synthetic trans-membrane peptides

(2008) Martin B. Ulmschneider et al.   MOLECULAR MEMBRANE BIOLOGY

Sensing voltage across lipid membranes

(2008) Kenton J. Swartz   NATURE

Prediction of membrane-protein topology from first principles

(2008) A. Bernsel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sampling efficiency in explicit and implicit membrane environments studied by peptide folding simulations

(2008) Jakob P. Ulmschneider et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Is Arginine Charged in a Membrane?

(2007) Libo Li et al.   BIOPHYSICAL JOURNAL