Article
Biochemistry & Molecular Biology
Emilien Etienne, Annalisa Pierro, Ketty C. Tamburrini, Alessio Bonucci, Elisabetta Mileo, Marlene Martinho, Valerie Belle
Summary: Site-directed spin labeling (SDSL) combined with continuous wave electron paramagnetic resonance (cw EPR) spectroscopy is a powerful technique to study protein dynamics. Numerical simulation using SimLabel, a graphical user interface (GUI) of Matlab, is proposed to analyze SDSL-EPR spectra and provide quantitative information on protein dynamics. Guidelines for simulating X-band cw-EPR spectra of nitroxide labeled proteins at room temperature are presented.
Article
Biochemical Research Methods
Barney L. Bales, Miroslav Peric, Daniel Kinzek, Robert N. Schwartz
Summary: This study investigates the T2 relaxation of inhomogeneously broadened lines in continuous wave EPR and resolves the complexities of obtaining T2 from DHLpp. Additionally, it demonstrates a direct and accurate method for comparing spin exchange frequencies between electron spin echo decay and continuous wave EPR data.
JOURNAL OF MAGNETIC RESONANCE
(2023)
Article
Biochemistry & Molecular Biology
Donatienne d'Hose, Pierre Danhier, Heidi Northshield, Pauline Isenborghs, Benedicte F. Jordan, Bernard Gallez
Summary: This paper describes a method to simultaneously analyze oxygen consumption rate (OCR) and superoxide production in a biological system using EPR spectroscopy with isotopically-labelled sensors. The EPR toolbox was validated in biological systems involving oxygen consumption and superoxide production, demonstrating its potential in studying complex mechanisms in biological systems.
Article
Chemistry, Inorganic & Nuclear
Angeliki Giannoulis, David B. Cordes, Alexandra M. Z. Slawin, Bela E. Bode
Summary: Pulse dipolar electron paramagnetic resonance spectroscopy (PDS) is used to understand chemical and biological assemblies at the nanometer range. In this study, a low-spin Co-II complex with a nitroxide (NO) moiety was synthesized as an alternative spin center for PDS. Various spectroscopic techniques were used to measure the Co-II-NO distances, and the results showed that PDS measurements were feasible even in the presence of complex disproportionation. The study demonstrated the potential of using paramagnetic Co-II ions in PDS studies at medium magnetic fields.
Article
Chemistry, Physical
C. Blake Wilson, Mian Qi, Songi Han, Mark S. Sherwin
Summary: Favorable relaxation processes, high-field spectral properties, and biological compatibility have made spin-7/2 Gd3+-based spin labels an increasingly popular choice for protein structure studies. However, the mechanisms of high-field relaxation and decoherence in half-integer high-spin systems like Gd3+ are still not well understood. This study presents a comprehensive model of high-field, high-spin decoherence and provides insights into the design of experiments using Gd3+ as spin probes or relaxivity agents.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS
(2023)
Article
Chemistry, Physical
Vinayak Rane
Summary: A novel optically hyperpolarized EPR imaging method (OH-EPRI) is proposed, which combines optical hyperpolarization generation with rapid scan EPR for signal detection. OH-EPRI overcomes the limitations of conventional EPRI and achieves higher spatial resolution.
JOURNAL OF PHYSICAL CHEMISTRY B
(2022)
Review
Biochemistry & Molecular Biology
F. Torricella, A. Pierro, E. Mileo, V Belle, A. Bonucci
Summary: SDSL-EPR technique involves attaching a paramagnetic label to specific positions of proteins for EPR spectroscopic study, providing information on local conformational dynamics, distances between spin centers, structures, and functions. The versatility of this spectroscopic approach in protein structural characterization has been demonstrated through recent studies, aiming to spread its applicability in various fields of structural biology, particularly for non-experts.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
(2021)
Article
Biochemical Research Methods
Yaron Artzi, Yakir Yishay, Marco Fanciulli, Moamen Jbara, Aharon Blank
Summary: The field of electron spin resonance constantly seeks to improve its capabilities, with a focus on developing better resonators to enhance spin sensitivity. Surface micro-resonators made of superconducting materials, such as yttrium barium copper oxide (YBCO), offer potential solutions to some issues but face challenges related to electric current vortices. Further research on the effects of current vortices on the ESR signal and spins' coherence times is essential for future advancements in the field.
JOURNAL OF MAGNETIC RESONANCE
(2022)
Article
Chemistry, Multidisciplinary
Nikita G. Osipov, Maxim A. Faraonov, Alexander F. Shestakov, Maxim V. Mikhailenko, Alexey V. Kuzmin, Salavat S. Khasanov, Akihiro Otsuka, Hideki Yamochi, Hiroshi Kitagawa, Dmitri V. Konarev
Summary: Photochromic molecules can coordinate with metal ions and transform from closed to open forms, resulting in color change. The interaction between photochromic TMI-NPS and Mn(II) hexafluoroacetylacetonate leads to the formation of a deep red-violet solution, indicating a coordination-induced transition. Precipitation of crystals produces {Mn-II(hfac)(2)center dot(mu(2)-TMI-NPS)}(2) dimers, which show weak ferromagnetic exchange between Mn-II spins.
NEW JOURNAL OF CHEMISTRY
(2023)
Article
Engineering, Electrical & Electronic
Antonin Sojka, Matus Sedivy, Adam Lagin, Andrej Gabris, Tomas Laznicka, Vinicius Tadeu Santana, Oleksii Laguta, Petr Neugebauer
Summary: This article presents a set of exchangeable sample holders for a sub-THz ESR spectrometer, allowing fast-loading and measurements at high magnetic fields and various temperature ranges. The solution expands the applications of HF-ESR spectroscopy.
IEEE TRANSACTIONS ON INSTRUMENTATION AND MEASUREMENT
(2022)
Article
Chemistry, Multidisciplinary
Zhimin Yang, Richard A. Stein, Maren Pink, Peter Madzelan, Thacien Ngendahimana, Suchada Rajca, Mark A. Wilson, Sandra S. Eaton, Gareth R. Eaton, Hassane S. Mchaourab, Andrzej Rajca
Summary: We report complex formation between the chloroacetamide 2,6-diazaadamantane nitroxide radical (ClA-DZD) and cucurbit[7]uril (CB-7), which significantly immobilizes the radical and allows for reliable measurement of interspin distances. These findings have important implications for supramolecular recognition-enabled long-distance DEER measurements at near physiological temperatures.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
(2023)
Article
Physics, Applied
Eiji Ohmichi, Yuto Shoji, Hideyuki Takahashi, Hitoshi Ohta
Summary: In this study, FDESR spectroscopy in the terahertz region was demonstrated using continuously tunable photomixers, with spectral resolution greatly improved by a pair of fiber stretchers. The technique allowed for determination of THz electric field amplitude at each frequency, resulting in a spectral resolution of about 1 MHz, and enabling high-resolution ESR spectroscopy in a broad frequency range.
APPLIED PHYSICS LETTERS
(2021)
Article
Chemistry, Multidisciplinary
Hirokazu Kobayashi, Kento Akiniwa, Fumiyasu Iwahori, Hidehiko Honda, Masato Yamamoto, Yuki Odanaka, Masahiro Inagaki
Summary: The study utilized ESR spectroscopy technique to investigate various organic radicals dispersed in PMMA matrix, showing that the PMMA matrix contains cylindrical nanospaces and different radicals could be used to determine the structures, sizes, and shapes of the nanospaces.
Article
Physics, Applied
O. Laguta, A. Sojka, A. Marko, P. Neugebauer
Summary: The development of pulse electron spin resonance (ESR) spectroscopy at microwave frequencies above 100 GHz is challenging, but rapid scan ESR is an alternative technique that provides spin relaxation time information. The method utilizes fast sweeps of the excitation microwave frequency, and the relaxation time can be extracted through fitting the spectrum.
APPLIED PHYSICS LETTERS
(2022)
Article
Chemistry, Physical
Joshua L. Wort, Swati Arya, Katrin Ackermann, Alan J. Stewart, Bela E. Bode
Summary: Pulse-dipolar EPR is an attractive method for structural characterization in solution, especially when paired with genetically encoded self-assembling spin labels and Cu-II-chelates. The combination of room-temperature isothermal titration calorimetry and cryogenic relaxation-induced dipolar modulation enhancement showed that the double-histidine motif spin labeling with Cu-II-nitrilotriacetic acid is robust against competition from Zn-II-NTA and maintains high nM binding affinity even under acidic and basic conditions. The strategy is well-suited for diverse biological applications, with the requirement of other metal ion cofactors or slightly acidic pH not necessarily being prohibitive.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS
(2021)
Article
Chemistry, Physical
Marc Florent, Rajiv Wallace, Teresa J. Bandosz
JOURNAL OF COLLOID AND INTERFACE SCIENCE
(2015)
Article
Chemistry, Applied
Marc Florent, Teresa J. Bandosz
MICROPOROUS AND MESOPOROUS MATERIALS
(2015)
Article
Engineering, Environmental
Marc Florent, Dimitrios A. Giannakoudakis, Rajiv Wallace, Teresa J. Bandosz
JOURNAL OF HAZARDOUS MATERIALS
(2017)
Article
Chemistry, Physical
Rajiv Wallace, Dimitrios A. Giannakoudakis, Marc Florent, Christopher J. Karwacki, Teresa Bandosz
JOURNAL OF MATERIALS CHEMISTRY A
(2017)
Article
Chemistry, Physical
Marc Florent, Teresa J. Bandosz
JOURNAL OF MATERIALS CHEMISTRY A
(2018)
Article
Chemistry, Physical
Marc Florent, Marialaura Tocci, Teresa J. Bandosz
Article
Chemistry, Applied
Marc Florent, Daniella Goldfarb
MICROPOROUS AND MESOPOROUS MATERIALS
(2012)
Article
Chemistry, Applied
Alfonso Policicchio, Marc Florent, Alain Celzard, Vanessa Fierro, Jacek Jagiello, Teresa J. Bandosz
MICROPOROUS AND MESOPOROUS MATERIALS
(2020)
Article
Multidisciplinary Sciences
Giacomo de Falco, Marc Florent, Jacek Jagiello, Yongqiang Cheng, Luke L. Daemen, Anibal J. Ramirez-Cuesta, Teresa J. Bandosz
Summary: This study demonstrates that the extent of oxygen adsorption/interactions with the surface is a key factor affecting the efficiency of the electrochemical oxygen reduction reaction (ORR) on carbon catalysts. Oxygen physical adsorption in small pores and specific interactions with surface ether functionalities positively influence ORR efficiency. Ultramicropores and hydrophobic surfaces rich in ether-based groups and/or electrons enhance ORR on carbon electrocatalysts, with performance parameters similar to those on Pt/C.
Article
Chemistry, Physical
Marc Florent, Konrad Rotnicki, Natalia Przybylska, Malgorzata Sliwinska-Bartkowiak, Teresa J. Bandosz
Summary: The trends in the value and shift of a water melting point in nanoporous carbons of distinctive surface chemistry were analyzed. The surface chemistry and porosity of carbons affect the behavior of water, with hydrophobic carbons showing smaller decreases in melting point compared to hydrophilic carbons.
Article
Chemistry, Physical
Paola S. Pauletto, Marc Florent, Teresa J. Bandosz
Summary: This study tested commercial activated carbon, carbon black, and zirconium-based metal-organic framework as adsorbents for perfluorooctanesulfonic acid (PFOS). The results showed that carbon black was the most effective adsorbent due to its large mesopores and hydrophobic nature.
Article
Chemistry, Physical
Niklas Unglaube, Marc Florent, Thomas Otto, Adrian Gutierrez-Serpa, Markus Stoetzer, Julia Grothe, Stefan Kaskel, Teresa J. Bandosz
Summary: Activated carbon with modified surface chemistry and porosity effectively removes formaldehyde at room temperature. The addition of nitrogen enhances the adsorption capacity, particularly in ultramicropores, increasing the utilization of the carbon surface.
Article
Chemistry, Multidisciplinary
Mariusz Barczak, Marc Florent, Snehal S. Bhalekar, Katsumi Kaneko, Robert J. Messinger, Teresa J. Bandosz
Summary: Sulfur-tuned advanced carbons (STACs) with high sulfur loading are successfully synthesized using a steam-assisted sulfur insertion method. These materials exhibit high sulfur loading, high electrical conductivity, and hydrophobicity. The penetration of sulfur can be controlled to fill different pore sizes, allowing for pore-size-dependent sulfur allocation and controllable porosity.
ADVANCED FUNCTIONAL MATERIALS
(2023)
Article
Chemistry, Physical
Niklas Unglaube, Marc Florent, Thomas Otto, Markus Stoetzer, Julia Grothe, Stefan Kaskel, Teresa J. Bandosz
Summary: The surfaces of phosphoric acid activated carbon and steam activated carbon were modified by introducing S- and N- groups from thiourea, resulting in an incorporation of significant amounts of nitrogen and sulfur. The thermal treatment altered the surface chemistry and porosity, and the activity of the modified carbon for formaldehyde removal was influenced by the type and amount of heteroatoms incorporated. The modified carbon with specific adsorption centers in larger pores showed efficient utilization for HCHO removal at ambient conditions.
JOURNAL OF COLLOID AND INTERFACE SCIENCE
(2024)
Article
Chemistry, Physical
Deicy Barrera, Marc Florent, Margarita Kulko, Teresa J. Bandosz
JOURNAL OF MATERIALS CHEMISTRY A
(2019)