Whole-Genome Scans Provide Evidence of Adaptive Evolution in Malawian Plasmodium falciparum Isolates

estMOI: estimating multiplicity of infection using parasite deep sequencing data

(2014) Samuel A. Assefa et al.   BIOINFORMATICS

Return of Widespread Chloroquine-Sensitive Plasmodium falciparum to Malawi

(2014) Anne E. P. Frosch et al.   JOURNAL OF INFECTIOUS DISEASES

Genome-Wide Analysis of Selection on the Malaria Parasite Plasmodium falciparum in West African Populations of Differing Infection Endemicity

(2014) Victor A. Mobegi et al.   MOLECULAR BIOLOGY AND EVOLUTION

PlasmoView: A Web-based Resource to Visualise Global Plasmodium falciparum Genomic Variation

(2013) Mark D. Preston et al.   JOURNAL OF INFECTIOUS DISEASES

Genome-wide screen identifies new candidate genes associated with artemisinin susceptibility in Plasmodium falciparum in Kenya

(2013) Steffen Borrmann et al.   Scientific Reports

Use of Massively Parallel Pyrosequencing to Evaluate the Diversity of and Selection on Plasmodium falciparum csp T-Cell Epitopes in Lilongwe, Malawi

(2012) Jeffrey A. Bailey et al.   JOURNAL OF INFECTIOUS DISEASES

Entomological indices of malaria transmission in Chikhwawa district, Southern Malawi

(2012) Themba Mzilahowa et al.   MALARIA JOURNAL

Using CF11 cellulose columns to inexpensively and effectively remove human DNA from Plasmodium falciparum-infected whole blood samples

(2012) Meera Venkatesan et al.   MALARIA JOURNAL

SNP Genotyping Identifies New Signatures of Selection in a Deep Sample of West African Plasmodium falciparum Malaria Parasites

(2012) Alfred Amambua-Ngwa et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic Sequencing of Plasmodium falciparum Malaria Parasites from Senegal Reveals the Demographic History of the Population

(2012) Hsiao-Han Chang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

(2012) Magnus Manske et al.   NATURE

Harnessing genomics and genome biology to understand malaria biology

(2012) Sarah K. Volkman et al.   NATURE REVIEWS GENETICS

Population Genomic Scan for Candidate Signatures of Balancing Selection to Guide Antigen Characterization in Malaria Parasites

(2012) Alfred Amambua-Ngwa et al.   PLoS Genetics

Shedding of TRAP by a Rhomboid Protease from the Malaria Sporozoite Surface Is Essential for Gliding Motility and Sporozoite Infectivity

(2012) Ijeoma Ejigiri et al.   PLoS Pathogens

Malaria control in Malawi: Current status and directions for the future

(2011) Don P. Mathanga et al.   ACTA TROPICA

Role of Plasmodium falciparum Chloroquine Resistance Transporter and Multidrug Resistance 1 Genes on In Vitro Chloroquine Resistance in Isolates of Plasmodium falciparum from Thailand

(2011) Chavachol Setthaudom et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Malaria Parasite clag3 Genes Determine Channel-Mediated Nutrient Uptake by Infected Red Blood Cells

(2011) Wang Nguitragool et al.   CELL

Seasonal and geographic differences in treatment-seeking and household cost of febrile illness among children in Malawi

(2011) Victoria L Ewing et al.   MALARIA JOURNAL

A new world malaria map: Plasmodium falciparum endemicity in 2010

(2011) Peter W Gething et al.   MALARIA JOURNAL

Drug-Resistant Genotypes and Multi-Clonality in Plasmodium falciparum Analysed by Direct Genome Sequencing from Peripheral Blood of Malaria Patients

(2011) Timothy Robinson et al.   PLoS One

An Effective Method to Purify Plasmodium falciparum DNA Directly from Clinical Blood Samples for Whole Genome High-Throughput Sequencing

(2011) Sarah Auburn et al.   PLoS One

Identification and Functional Validation of the Novel Antimalarial Resistance Locus PF10_0355 in Plasmodium falciparum

(2011) Daria Van Tyne et al.   PLoS Genetics

High recombination rates and hotspots in a Plasmodium falciparum genetic cross

(2011) Hongying Jiang et al.   GENOME BIOLOGY

Allele Frequency-Based and Polymorphism-Versus-Divergence Indices of Balancing Selection in a New Filtered Set of Polymorphic Genes in Plasmodium falciparum

(2010) L. I. Ochola et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Selection Landscape of Malaria Parasites

(2010) M. J. Mackinnon et al.   SCIENCE

Mitochondrial Evolution and Functions in Malaria Parasites

(2009) Akhil B. Vaidya et al.   Annual Review of Microbiology

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Chloroquine resistance before and after its withdrawal in Kenya

(2009) Leah Mwai et al.   MALARIA JOURNAL

Genetics in geographically structured populations: defining, estimating and interpreting FST

(2009) Kent E. Holsinger et al.   NATURE REVIEWS GENETICS

Accurate whole human genome sequencing using reversible terminator chemistry

(2008) David R. Bentley et al.   NATURE

Adaptive Copy Number Evolution in Malaria Parasites

(2008) Shalini Nair et al.   PLoS Genetics