Prediction of ketoacyl synthase family using reduced amino acid alphabets

Prediction and Analysis of Protein Hydroxyproline and Hydroxylysine

(2011) Le-Le Hu et al.   PLoS One

Identify Golgi Protein Types with Modified Mahalanobis Discriminant Algorithm and Pseudo Amino Acid Composition

(2011) Hui Ding et al.   PROTEIN AND PEPTIDE LETTERS

Prediction of midbody, centrosome and kinetochore proteins based on gene ontology information

(2010) Wei Chen et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Review of MARCH-INSIDE & Complex Networks Prediction of Drugs: ADMET, Anti-parasite Activity, Metabolizing Enzymes and Cardiotoxicity Proteome Biomarkers

(2010) Humberto Gonzalez-Diaz et al.   CURRENT DRUG METABOLISM

Review of QSAR Models for Enzyme Classes of Drug Targets: Theoretical Background and Applications in Parasites, Hosts and Other Organisms

(2010) Riccardo Concu et al.   CURRENT PHARMACEUTICAL DESIGN

Supersecondary structure prediction using Chou's pseudo amino acid composition

(2010) Dongsheng Zou et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Prediction of thermophilic proteins using feature selection technique

(2010) Hao Lin et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition

(2010) Hao Lin et al.   JOURNAL OF THEORETICAL BIOLOGY

Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition

(2010) Maqsood Hayat et al.   JOURNAL OF THEORETICAL BIOLOGY

AFP-Pred: A random forest approach for predicting antifreeze proteins from sequence-derived properties

(2010) Krishna Kumar Kandaswamy et al.   JOURNAL OF THEORETICAL BIOLOGY

ThYme: a database for thioester-active enzymes

(2010) D. C. Cantu et al.   NUCLEIC ACIDS RESEARCH

Prediction of G-Protein-Coupled Receptor Classes in Low Homology Using Chous Pseudo Amino Acid Composition with Approximate Entropy and Hydrophobicity Patterns

(2010) Quan Gu et al.   PROTEIN AND PEPTIDE LETTERS

An accurate feature-based method for identifying DNA-binding residues on protein surfaces

(2010) Yi Xiong et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Improved identification of outer membrane beta barrel proteins using primary sequence, predicted secondary structure, and evolutionary information

(2010) Marcin J. Mizianty et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Using K-minimum increment of diversity to predict secretory proteins of malaria parasite based on groupings of amino acids

(2009) Yong-Chun Zuo et al.   AMINO ACIDS

3D entropy and moments prediction of enzyme classes and experimental-theoretic study of peptide fingerprints in Leishmania parasites

(2009) R. Concu et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Prediction of Enzyme Classes from 3D Structure: A General Model and Examples of Experimental-Theoretic Scoring of Peptide Mass Fingerprints ofLeishmaniaProteins

(2009) Riccardo Concu et al.   JOURNAL OF PROTEOME RESEARCH

Alignment-Free Prediction of Polygalacturonases with Pseudofolding Topological Indices: Experimental Isolation fromCoffea arabicaand Prediction of a New Sequence

(2009) Guillermín Agüero-Chapin et al.   JOURNAL OF PROTEOME RESEARCH

QSAR for RNases and theoretic–experimental study of molecular diversity on peptide mass fingerprints of a new Leishmania infantum protein

(2009) Humberto González-Díaz et al.   MOLECULAR DIVERSITY

Multi Label Learning for Prediction of Human Protein Subcellular Localizations

(2009) Lin Zhu et al.   PROTEIN JOURNAL

HP-Lattice QSAR for dynein proteins: Experimental proteomics (2D-electrophoresis, mass spectrometry) and theoretic study of a Leishmania infantum sequence

(2008) María Auxiliadora Dea-Ayuela et al.   BIOORGANIC & MEDICINAL CHEMISTRY

A genetic approach for building different alphabets for peptide and protein classification

(2008) Loris Nanni et al.   BMC BIOINFORMATICS

Computational chemistry study of 3D-structure-function relationships for enzymes based on Markov models for protein electrostatic, HINT, and van der Waals potentials

(2008) Riccardo Concu et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Enzymes/non-enzymes classification model complexity based on composition, sequence, 3D and topological indices

(2008) Cristian Robert Munteanu et al.   JOURNAL OF THEORETICAL BIOLOGY

The modified Mahalanobis Discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition

(2008) Hao Lin   JOURNAL OF THEORETICAL BIOLOGY

Proteomics, networks and connectivity indices

(2008) Humberto González-Díaz et al.   PROTEOMICS