Article
Plant Sciences
Zhen Li, Lan Yun, Zhiqi Gao, Tian Wang, Xiaomin Ren, Yan Zhao
Summary: This study analyzed the genetic diversity and population structure of Psathyrostachys juncea using molecular markers, and evaluated the genetic differentiation related to tillering traits. The results showed that the overall genetic relationship of P. juncea individuals was relatively close, and there was a significant correlation between genetic relationship and geographical distribution.
FRONTIERS IN PLANT SCIENCE
(2022)
Article
Genetics & Heredity
Jie Lu, Yichen Zhang, Xia Diao, Kun Yu, Xiongwei Dai, Peng Qu, M. James C. Crabbe, Ticao Zhang, Qin Qiao
Summary: Fragaria nilgerrensis is a diploid wild strawberry widely distributed in Southwest China, showing high genetic diversity and significant genetic differentiation among populations. The study revealed that the species has high genetic diversity, while displaying little gene flow between populations.
Article
Forestry
Yuhan Wu, Yanpeng Gu, Yizeng Lu, Ze Zhang, Ruili Zhang, Jian Zheng
Summary: The study investigated the genetic diversity and differentiation of natural populations of Sorbus pohuashanensis in northern China. Results showed high genetic diversity but significant genetic differentiation. Significant genetic relationships were observed among populations, with higher genetic variation within populations. The study provides insights for the conservation and utilization of genetic resources of S. pohuashanensis.
TREES-STRUCTURE AND FUNCTION
(2021)
Article
Biotechnology & Applied Microbiology
Wanling Yang, Zhiyi Bai, Fuqiang Wang, Mingzhu Zou, Xinru Wang, Jiankun Xie, Fantao Zhang
Summary: The genetic diversity and population structure of Monochasma savatieri individuals from four provinces in China were examined using EST-SSR markers, revealing low genetic diversity among populations and little gene flow within populations. Individuals from Zhejiang province showed the highest genetic diversity among the four populations. The study provided insights for designing effective conservation strategies for M. savatieri.
Article
Genetics & Heredity
Karina Ustariz, Mulatu Geleta, Helena Persson Hovmalm, Rodomiro Ortiz
Summary: In this study, the genetic diversity of Festuca species in the highlands of Bolivia was evaluated using EST-SSR markers. The results showed low genetic differentiation between populations and the newly developed markers are highly valuable for assessing the genetic diversity of Bolivian fescues and related species.
Article
Forestry
Zhi Yao, Zhi Feng, Chunwen Wu, Longping Tang, Xiuzhong Wu, Dahua Chen, Qiye Wang, Kaifang Fan, Yiqiang Wang, Meng Li
Summary: This study investigates the genetic diversity of Ginkgo biloba populations using EST-SSR markers. The results show a high level of genetic diversity and the construction of a core collection comprising 27 genetic resources. The developed molecular markers will facilitate future breeding of Ginkgo biloba.
Article
Agronomy
Haizheng Xiong, Yilin Chen, San-Ji Gao, Yong-Bao Pan, Ainong Shi
Summary: This study assessed the genetic diversity and population structure of 196 Saccharum accessions, including various species and hybrids, using multiple analysis methods. The results showed that different species of sugarcane merged together, and specific alleles were important for sugarcane breeding and species identification. These findings provide valuable information for future genetic research and utilization of sugarcane germplasm resources.
Article
Agronomy
Zihao Wang, Hao Zhang, Boqiang Tong, Biao Han, Dan Liu, Ping Zhang, Dechang Hu
Summary: The present study investigated the genetic diversity and structure of endangered Juglans mandshurica populations in China. The results showed relatively low genetic diversity in J. mandshurica populations in Shandong areas, with high gene flow among populations potentially due to long-distance pollen transmission. Cluster analysis divided the populations into two groups, and structure analysis suggested interspecific introgression between J. mandshurica and common walnuts.
GENETIC RESOURCES AND CROP EVOLUTION
(2023)
Article
Biochemistry & Molecular Biology
Qi Zhou, Peng-Yan Zhou, Wen-Tao Zou, Yin-Gang Li
Summary: High-throughput sequencing of the Phoebe bournei transcriptome led to the identification of novel SSR markers, and genetic analyses revealed significant genetic differences among populations, with the YS population from Jiangxi province showing the highest genetic diversity.
MOLECULAR BIOLOGY REPORTS
(2021)
Article
Materials Science, Textiles
Md Al-Mamun, Mohd Y. Rafii, Yusuff Oladosu, Azizah Binti Misran, Zulkarami Berahim, Zaiton Ahmad, Fatai Arolu, Md Mahmudul Hasan Khan
Summary: Genetic diversity among Hibiscus cannabinus L. lines was assessed using polymorphic EST-SSR, revealing clear polymorphic bands and an average of 5.2 alleles per primer. The PIC values indicated genetic diversity, with significant variation observed within the population. Analysis also showed genetic differentiation and gene flow, grouping kenaf mutants into five major categories based on UPGMA dendrogram.
JOURNAL OF NATURAL FIBERS
(2022)
Article
Agronomy
Xiaoguang Wang, Xiang Liu, Zhifeng Zhang, Ying Chen, Lu Bai, Yue Du, Shijie Zhang, Zhiguo Zhang, Kun He, Min Fan, Qiaoping Qin
Summary: Daylily cultivars were analyzed using SSR markers, with a total of 9139 loci detected. The study identified 30 polymorphic EST-SSR markers and found a total of 98 alleles. Cluster analysis showed two phylogenetic groups among daylilies and night lilies.
GENETIC RESOURCES AND CROP EVOLUTION
(2023)
Article
Biodiversity Conservation
Xiaoyang Gao, Qixuan Su, Baolin Yao, Wenjing Yang, Weisi Ma, Bin Yang, Changning Liu
Summary: The genetic characteristics of cultivated populations of Paris polyphylla were analyzed using expressed sequence tag simple sequence repeat markers. The study found high genetic polymorphism levels within populations, low differentiation among populations, and high levels of genetic diversity among individuals, resulting in hybridization and gene flow. The genetic structure analysis suggested cross-pollination among cultivars. These findings provide insights into the genetic diversity and can aid in marker-assisted breeding for this medicinal herb.
Article
Agronomy
Wenjun Shi, Defang Zhang, Dejuan Ji, Xudun Guo
Summary: This study investigated the distribution characteristics of SSRs in Nitraria tangutorum Bobr and developed SSR markers for genetic diversity research. The results showed that habitat fragmentation and human interference are the main factors affecting population differentiation and diversity reduction.
GENETIC RESOURCES AND CROP EVOLUTION
(2023)
Article
Forestry
Bin Huang, Zhongwei Wang, Jianjian Huang, Xiaohui Li, Heng Zhu, Qiang Wen, Li-an Xu
Summary: This study investigated the genetic diversity of Camellia chekiangoleosa and found that the genetic diversity was low overall, with high diversity in central populations and high genetic differentiation among populations. The low genetic diversity can be attributed to small population sizes, bottleneck effects, inbreeding within populations, and low gene flow among populations.
Article
Forestry
Liyuan Wang, Huawei Li, Yujing Suo, Weijuan Han, Songfeng Diao, Yini Mai, Peng Sun, Jianmin Fu
Summary: SSRs related to parent selection of D. kaki were validated by transcriptome sequencing in this study, and genetic diversity of these markers among persimmon germplasm resources was investigated. 13 newly developed SSR markers were identified for efficient selection of appropriate persimmon cultivars for cross-breeding, which will not only promote persimmon cross-breeding programs but also assist in genetic resource identification and conservation.
TREES-STRUCTURE AND FUNCTION
(2021)
Article
Plant Sciences
Edouard Boex-Fontvieille, Sachin Rustgi, Steffen Reinbothe, Christiane Reinbothe
JOURNAL OF EXPERIMENTAL BOTANY
(2015)
Article
Biochemical Research Methods
Xiufang Ou, Tingting Zhuang, Wenchao Yin, Yiling Miao, Bo Wang, Yunhong Zhang, Xiuyun Lin, Chunming Xu, Diter von Wettstein, Sachin Rustgi, Bao Liu
PLANT MOLECULAR BIOLOGY REPORTER
(2015)
Article
Multidisciplinary Sciences
Steffen Reinbothe, John Gray, Sachin Rustgi, Diter von Wettstein, Christiane Reinbothe
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2015)
Article
Multidisciplinary Sciences
Armin Springer, ChulHee Kang, Sachin Rustgi, Diter von Wettstein, Christiane Reinbothe, Stephan Pollmann, Steffen Reinbothe
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2016)
Article
Plant Sciences
Edouard Boex-Fontvieille, Sachin Rustgi, Diter von Wettstein, Stephan Pollmann, Steffen Reinbothe, Christiane Reinbothe
FRONTIERS IN PLANT SCIENCE
(2016)
Article
Biochemistry & Molecular Biology
Claudia Rossig, John Gray, Oscar Valdes, Sachin Rustgi, Diter von Wettstein, Christiane Reinbothe, Steffen Reinbothe
JOURNAL OF INTEGRATIVE PLANT BIOLOGY
(2017)
Article
Biochemistry & Molecular Biology
Frank Buhr, Abderrahim Lahroussi, Armin Springer, Sachin Rustgi, Diter von Wettstein, Christiane Reinbothe, Steffen Reinbothe
PLANT MOLECULAR BIOLOGY
(2017)
Article
Multidisciplinary Sciences
Sachin Rustgi, Edouard Boex-Fontvieille, Christiane Reinbothe, Diter von Wettstein, Steffen Reinbothe
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2017)
Article
Plant Sciences
Mingming Yang, Xiang Gao, Jian Dong, Nitant Gandhi, Huanjie Cai, Diter H. von Wettstein, Sachin Rustgi, Shanshan Wen
FRONTIERS IN PLANT SCIENCE
(2017)
Review
Nutrition & Dietetics
Claudia E. Osorio, Jaime H. Mejias, Sachin Rustgi
Article
Plant Sciences
Sruthi Narayanan, Zolian S. Zoong-Lwe, Nitant Gandhi, Ruth Welti, Benjamin Fallen, James R. Smith, Sachin Rustgi
Article
Biochemistry & Molecular Biology
Steffen Reinbothe, Claudia Rossig, John Gray, Sachin Rustgi, Diter von Wettstein, Christiane Reinbothe, Joachim Rassow
Summary: A protein complex has been identified that facilitates the import of AaRS and tRNA into the mitochondria of Arabidopsis thaliana, shedding light on the process of transport of cytosolic AaRS and tRNA into mitochondria.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Plant Sciences
Grant T. Billings, Michael A. Jones, Sachin Rustgi, William C. Bridges, James B. Holland, Amanda M. Hulse-Kemp, B. Todd Campbell
Summary: In this study, genotypic and phenotypic data on historical Upland cotton lines were used to investigate the potential for genomics-based selection and genomic prediction of fiber quality and other quantitative traits. The results show that genomic selection for fiber quality can be implemented immediately, while the prediction ability for other traits is lower but consistent with heritability. Stably detected genomic hits can improve prediction accuracy.
Article
Genetics & Heredity
Salman Naveed, Johnson Toyinbo, Hrishikesh Ingole, Prasanna Valavanur Shekar, Michael Jones, B. Todd Campbell, Sachin Rustgi
Summary: Cotton germplasm with reduced regrowth after defoliation and early maturity was developed by altering the growth habit of cotton. High-performance progeny lines with desirable traits were selected based on gene expression analysis and genetic crosses. Some of these lines have entered advanced testing and will be released as germplasm lines.
Article
Biochemistry & Molecular Biology
Edouard Boex-Fontvieille, Sachin Rustgi, Diter Von Wettstein, Stephan Pollmann, Steffen Reinbothe, Christiane Reinbothe
PLANT SIGNALING & BEHAVIOR
(2016)