PockDrug-Server: a new web server for predicting pocket druggability on holo and apo proteins

PockDrug: A Model for Predicting Pocket Druggability That Overcomes Pocket Estimation Uncertainties

(2015) Alexandre Borrel et al.   Journal of Chemical Information and Modeling

Extraction of Protein Binding Pockets in Close Neighborhood of Bound Ligands Makes Comparisons Simple Due to Inherent Shape Similarity

(2014) Timo Krotzky et al.   Journal of Chemical Information and Modeling

PLIC: protein–ligand interaction clusters

(2014) Praveen Anand et al.   Database-The Journal of Biological Databases and Curation

iDrug: a web-accessible and interactive drug discovery and design platform

(2014) Xia Wang et al.   Journal of Cheminformatics

Knowledge-based Fragment Binding Prediction

(2014) Grace W. Tang et al.   PLoS Computational Biology

APoc: large-scale identification of similar protein pockets

(2013) Mu Gao et al.   BIOINFORMATICS

Druggability of the enzymes of the non-mevalonate-pathway

(2013) Tiziana Masini et al.   DRUG DISCOVERY TODAY

A molecular pathway for the egress of ammonia produced by nitrogenase

(2013) Ian Dance   Scientific Reports

Exploring Different Virtual Screening Strategies for Acetylcholinesterase Inhibitors

(2013) Nibha Mishra et al.   Biomed Research International

DoGSiteScorer: a web server for automatic binding site prediction, analysis and druggability assessment

(2012) A. Volkamer et al.   BIOINFORMATICS

Comparison and Druggability Prediction of Protein–Ligand Binding Sites from Pharmacophore-Annotated Cavity Shapes

(2012) Jérémy Desaphy et al.   Journal of Chemical Information and Modeling

Development of a Rule-Based Method for the Assessment of Protein Druggability

(2012) Emanuele Perola et al.   Journal of Chemical Information and Modeling

DrugPred: A Structure-Based Approach To Predict Protein Druggability Developed Using an Extensive Nonredundant Data Set

(2011) Agata Krasowski et al.   Journal of Chemical Information and Modeling

Combining Global and Local Measures for Structure-Based Druggability Predictions

(2011) Andrea Volkamer et al.   Journal of Chemical Information and Modeling

Open Babel: An open chemical toolbox

(2011) Noel M O'Boyle et al.   Journal of Cheminformatics

Druggable pockets and binding site centric chemical space: a paradigm shift in drug discovery

(2010) Stéphanie Pérot et al.   DRUG DISCOVERY TODAY

Analyzing the Topology of Active Sites: On the Prediction of Pockets and Subpockets

(2010) Andrea Volkamer et al.   Journal of Chemical Information and Modeling

Understanding and Predicting Druggability. A High-Throughput Method for Detection of Drug Binding Sites

(2010) Peter Schmidtke et al.   JOURNAL OF MEDICINAL CHEMISTRY

fpocket: online tools for protein ensemble pocket detection and tracking

(2010) P. Schmidtke et al.   NUCLEIC ACIDS RESEARCH

Fpocket: An open source platform for ligand pocket detection

(2009) Vincent Le Guilloux et al.   BMC BIOINFORMATICS

Identifying and Characterizing Binding Sites and Assessing Druggability

(2009) Thomas A. Halgren   Journal of Chemical Information and Modeling