Rumen bacterial community evaluated by 454 pyrosequencing and terminal restriction fragment length polymorphism analyses in dairy sheep fed marine algae

Simultaneous Amplicon Sequencing to Explore Co-Occurrence Patterns of Bacterial, Archaeal and Eukaryotic Microorganisms in Rumen Microbial Communities

(2013) Sandra Kittelmann et al.   PLoS One

Comparative Survey of Rumen Microbial Communities and Metabolites across One Caprine and Three Bovine Groups, Using Bar-Coded Pyrosequencing and1H Nuclear Magnetic Resonance Spectroscopy

(2012) Hyo Jung Lee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial ecology of the rumen evaluated by 454 GS FLX pyrosequencing is affected by starch and oil supplementation of diets

(2012) Asma Zened et al.   FEMS MICROBIOLOGY ECOLOGY

Fatty acid composition and bacterial community changes in the rumen fluid of lactating sheep fed sunflower oil plus incremental levels of marine algae

(2012) P.G. Toral et al.   JOURNAL OF DAIRY SCIENCE

Milk fat depression induced by dietary marine algae in dairy ewes: Persistency of milk fatty acid composition and animal performance responses

(2012) E. Bichi et al.   JOURNAL OF DAIRY SCIENCE

Dietary Fish Oil Supplements Modify Ruminal Biohydrogenation, Alter the Flow of Fatty Acids at the Omasum, and Induce Changes in the Ruminal Butyrivibrio Population in Lactating Cows

(2012) Kevin J. Shingfield et al.   JOURNAL OF NUTRITION

Fast, accurate error-correction of amplicon pyrosequences using Acacia

(2012) Lauren Bragg et al.   NATURE METHODS

Composition and Similarity of Bovine Rumen Microbiota across Individual Animals

(2012) Elie Jami et al.   PLoS One

Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci

(2012) Phillip B. Pope et al.   PLoS One

Effect of fibre- and starch-rich finishing diets on methanogenic Archaea diversity and activity in the rumen of feedlot bulls

(2011) M. Popova et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

As yet uncultured bacteria phylogenetically classified asPrevotella,Lachnospiraceaeincertae sedis and unclassifiedBacteroidales,ClostridialesandRuminococcaceaemay play a predominant role in ruminal biohydrogenation

(2011) Sharon A. Huws et al.   ENVIRONMENTAL MICROBIOLOGY

Microbiome analysis of dairy cows fed pasture or total mixed ration diets

(2011) Alexandre B. de Menezes et al.   FEMS MICROBIOLOGY ECOLOGY

The role of microbes in rumen lipolysis and biohydrogenation and their manipulation

(2010) M. Lourenço et al.   Animal

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Toxicity of unsaturated fatty acids to the biohydrogenating ruminal bacterium, Butyrivibrio fibrisolvens

(2010) Margarida RG Maia et al.   BMC MICROBIOLOGY

Evaluation of bacterial diversity in the rumen and feces of cattle fed different levels of dried distillers grains plus solubles using bacterial tag-encoded FLX amplicon pyrosequencing1

(2010) T. R. Callaway et al.   JOURNAL OF ANIMAL SCIENCE

Changes in the rumen bacterial community in response to sunflower oil and fish oil supplements in the diet of dairy sheep

(2010) A. Belenguer et al.   JOURNAL OF DAIRY SCIENCE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Role of the protozoan Isotricha prostoma, liquid-, and solid-associated bacteria in rumen biohydrogenation of linoleic acid

(2009) C. Boeckaert et al.   Animal

Rumen Bacterial Diversity Dynamics Associated with Changing from Bermudagrass Hay to Grazed Winter Wheat Diets

(2009) Dipti W. Pitta et al.   MICROBIAL ECOLOGY

Accumulation of trans C18:1 Fatty Acids in the Rumen after Dietary Algal Supplementation Is Associated with Changes in the Butyrivibrio Community

(2008) C. Boeckaert et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH