An Algorithm for Efficient Identification of Branched Metabolic Pathways

Finding metabolic pathways using atom tracking

(2010) Allison P. Heath et al.   BIOINFORMATICS

Microbial 1-butanol production: Identification of non-native production routes andin silicoengineering interventions

(2010) Sridhar Ranganathan et al.   Biotechnology Journal

Pathway identification by network pruning in the metabolic network of Escherichia coli

(2009) P. Gerlee et al.   BIOINFORMATICS

Response to comment on 'Can sugars be produced from fatty acids? A test case for pathway analysis tools'

(2009) L. F. d. Figueiredo et al.   BIOINFORMATICS

Rahnuma: hypergraph-based tool for metabolic pathway prediction and network comparison

(2009) Aziz Mithani et al.   BIOINFORMATICS

Inferring branching pathways in genome-scale metabolic networks

(2009) Esa Pitkänen et al.   BMC Systems Biology

Metabolic Pathfinding Using RPAIR Annotation

(2009) Karoline Faust et al.   JOURNAL OF MOLECULAR BIOLOGY

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2009) Ron Caspi et al.   NUCLEIC ACIDS RESEARCH

Genetic Modulation of the Overexpression of Tailoring Genes eryK and eryG Leading to the Improvement of Erythromycin A Purity and Production in Saccharopolyspora erythraea Fermentation

(2008) Y. Chen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization

(2008) Torsten Blum et al.   BIOINFORMATICS

A critical examination of stoichiometric and path-finding approaches to metabolic pathways

(2008) F. J. Planes et al.   BRIEFINGS IN BIOINFORMATICS

An Invitation to the Marriage of Metagenomics and Metabolomics

(2008) Peter J. Turnbaugh et al.   CELL

Structural biology of the purine biosynthetic pathway

(2008) Y. Zhang et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Using Atom Mapping Rules for an Improved Detection of Relevant Routes in Weighted Metabolic Networks

(2008) Torsten Blum et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Reconstruction of biochemical networks in microorganisms

(2008) Adam M. Feist et al.   NATURE REVIEWS MICROBIOLOGY