Article
Biochemistry & Molecular Biology
Johanne Le Coq, Pilar Lopez Navajas, Barbara Rodrigo Martin, Carlos Alfonso, Daniel Lietha
Summary: SHIP2 is a critical enzyme regulating various cellular events and is implicated in diseases like cancer and type 2 diabetes. The PHR domain acts as an allosteric module, regulating the catalytic activity of SHIP2 in response to specific phosphoinositide levels in the cell membrane.
Article
Immunology
Melina Michael, Barry McCormick, Karen E. Anderson, Utsa Karmakar, Matthieu Vermeren, Stephane Schurmans, Augustin Amour, Sonja Vermeren
Summary: Neutrophils, the most abundant circulating leukocytes in humans, play key roles in host defense and inflammation. The study reveals the important regulatory function of the phosphatase SHIP2 in neutrophil chemotaxis and directionality, offering insights into the complexity of PI3K signaling in neutrophils.
FRONTIERS IN IMMUNOLOGY
(2021)
Review
Endocrinology & Metabolism
E. Dale Abel
Summary: Insulin receptors play a critical role in regulating cardiac growth, survival, substrate uptake, and mitochondrial metabolism. Altered insulin signaling in the heart can contribute to ventricular remodeling and heart failure progression. Understanding the role of insulin signaling in cardiac physiology and pathology may have therapeutic implications for conditions like obesity and diabetes.
AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM
(2021)
Article
Biochemistry & Molecular Biology
Yuzheng Deng, Chunlei Wang, Meiling Zhang, Lijuan Wei, Weibiao Liao
Summary: This study identified the key genes and pathways involved in ethylene-induced adventitious root development in cucumber using transcriptome analysis. The results revealed the importance of carbon metabolism, secondary metabolism, and plant hormone signal transduction in ethylene-induced root development.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Review
Biochemistry & Molecular Biology
R. Ariel Igal, Debora Sinner
Summary: SCD1 is a central regulator of fatty acid metabolism in humans, while SCD5, as a second isoform, has started to receive attention for its potential role in metabolic regulation and biological functions.
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
(2021)
Review
Biochemistry & Molecular Biology
Csaba Mathe, Csongor Freytag, Adrienn Kelemen, Marta M-Hamvas, Tamas Garda
Summary: This review summarizes the multiple regulatory mechanisms of protein phosphatase PP2A, including regulation of metabolic pathways, subcellular localization, cellular processes, and stress responses in plants. The findings contribute to a better understanding of plant cell functioning, potential agricultural applications, and insights into how vascular plants including crops cope with diverse environmental challenges.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Review
Biochemistry & Molecular Biology
Aziz M. Rangwala, Victoria R. Mingione, George Georghiou, Markus A. Seeliger
Summary: Phosphorylation plays a vital role in regulating biological processes, and protein kinases have been extensively studied for their involvement in human health and disease. Some kinases possess additional catalytic functions in addition to phosphotransferase activity, while others have lost their catalytic activity completely. In this study, we analyzed the UniProtKB database for bifunctional protein kinases and focused on those crucial for bacterial and human cellular homeostasis. These kinases have diverse functional roles in environmental sensing, metabolic regulation, immune-host defense, and cell cycle control. This article explores their dual catalytic activities and their contributions to disease pathogenesis.
Article
Pharmacology & Pharmacy
Ava Safaroghli-Azar, Mohammad-Javad Sanaei, Atieh Pourbagheri-Sigaroodi, Davood Bashash
Summary: Lipid signaling refers to the biological process in which a lipid messenger binds to a protein target, converting its effects to specific cellular responses. The family of phosphoinositide 3-kinase (PI3K) plays a crucial role in this pathway, affecting various aspects of cellular biology such as cell survival, proliferation, migration, endocytosis, intracellular trafficking, metabolism, and autophagy. Different classes of PI3Ks have been identified in yeast and mammals, with class I PI3Ks being extensively studied in cancer biology. Abnormal activation of class I PI3Ks has been implicated in human tumors, particularly through activating mutations in the PIK3CA gene. Class II and III PI3Ks are involved in regulating vesicle trafficking and autophagy processes. This review aims to discuss the latest research findings on PI3Ks-mediated cell biological processes and explore the mechanisms by which different types of phosphoinositides derived from PI3Ks act.
EUROPEAN JOURNAL OF PHARMACOLOGY
(2023)
Article
Microbiology
Haojie Jin, Yan Wang, Yujie Fu, Devaki Bhaya
Summary: Cyanobacteria have an inherent advantage in phosphonate phytoremediation, but studies on phosphonate metabolism in cyanobacteria are limited. This study examined the regulation of the C-P lyase gene cluster in an undomesticated thermophilic Synechococcus OS-B ' and found a close relationship with Thermus thermophilus. The regulation of gene expression through Pho boxes and the Pho regulon two-component system was identified, with unexpected findings on phosphate concentration inhibiting Pho boxes.
ENVIRONMENTAL MICROBIOLOGY
(2021)
Article
Plant Sciences
Zhengbin Tang, Jia Zhao, Bin Yang, Shan Sun, Furong Xu, Zhoufei Wang
Summary: In this study, RNA sequencing was used to analyze the differentially expressed genes (DEGs) during seed germination of Paris polyphylla var. yunnanensis. Several genes potentially involved in seed germination were identified, providing a valuable resource for further studying the molecular basis of seed germination in this medicinal plant.
Review
Nutrition & Dietetics
Guoyan Wang, Lei Chen, Senlin Qin, Tingting Zhang, Junhu Yao, Yanglei Yi, Lu Deng
Summary: mTORC1 is a multi-protein complex found in eukaryotes that regulates cell growth and metabolism by sensing various extracellular and intracellular signals. Overactivation of mTORC1 is associated with the occurrence of metabolic diseases, making it an important target for therapeutic strategies.
ADVANCES IN NUTRITION
(2022)
Article
Biochemistry & Molecular Biology
Laura H. John, Fiona B. Naughton, Mark S. P. Sansom, Andreas Haahr Larsen
Summary: Phosphatase and tensin homologue (PTEN) and SH2-containing inositol 5 '-phosphatase 2 (SHIP2) are structurally and functionally similar, but their C2 domains have different roles in membrane interactions. The C2 domain of PTEN strongly interacts with anionic lipids and contributes to membrane recruitment, while the C2 domain of SHIP2 has weaker binding affinity for anionic membranes. The C2 domain in SHIP2 enhances the catalytic activity of the phosphatase domain through allosteric interdomain changes.
Article
Biotechnology & Applied Microbiology
Sota Honma, Shinsaku Ito, Shunsuke Yajima, Yasuyuki Sasaki
Summary: Nitric oxide (NO) serves as a signaling molecule in eukaryotic and prokaryotic cells, regulating secondary metabolism in bacteria such as Streptomyces. This study demonstrates the molecular mechanism by which endogenously produced NO controls antibiotic production via the DevS/R two-component system in S. coelicolor A3(2), shedding light on the regulatory mechanisms of NO in bacteria. The findings suggest that studying NO signaling in actinobacteria can aid in the development of strategies against pathogenic actinomycetes and in the actinobacterial industries.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Rita Borzsei, Bayartsetseg Bayarsaikhan, Balazs Zoltan Zsido, Beata Lontay, Csaba Hetenyi
Summary: PRMT5 is an important enzyme responsible for arginine methylation on various proteins. This study reveals that the phosphorylation of PRMT5 on T80 residue increases its methyltransferase activity and elevated levels of the enzyme were measured in certain types of cancer. The atomic level complex structure provides insights for the design of new inhibitors and further understanding of PRMT enzymes.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Review
Plant Sciences
Anahid E. Powell, Alexander Heyl
Summary: Through studying genome and transcriptome data, we are able to understand the evolutionary changes in plant hormone metabolism and signaling. By focusing on cytokinin biology, we can synthesize key points about the evolution of cytokinin metabolism and signaling, and apply these findings to the evolution of other phytohormones.
FRONTIERS IN PLANT SCIENCE
(2023)