Article
Chemistry, Applied
Jelena Surlan, Zita Seres, Ljubica Dokic, Veljko Krstonosic, Nikola Maravic
Summary: The influence of sodium chloride on the conformation and structure of sugar beet pectin in aqueous solutions was thoroughly characterized in this study. The relative viscosity and specific conductivity of the solutions decreased after the addition of sodium chloride, indicating changes in the pectin's conformation and structure. The addition of sodium chloride also affected the surface tension and zeta potential of the solutions. These findings suggest a possible transition from linear to globular conformation of the pectin macromolecular chain.
FOOD HYDROCOLLOIDS
(2023)
Article
Biochemistry & Molecular Biology
Farzaneh Samandar, Sara Malek-Mohammadi, Zahra Aram, Farangis Rastin, Shakiba Tolou-Shikhzadeh-Yazdi, Zeinab Amiri-Tehranizadeh, Mohammad Reza Saberi, Jamshidkhan Chamani
Summary: This study investigated the binding process of riboflavin (RF) with beta-lactoglobulin (beta LG) and beta-casein (beta CN) in binary and ternary systems. The results showed that the increasing concentration of RF reduced the fluorescence intensity and caused quenching of the proteins. Spectroscopic techniques and molecular modeling confirmed the formation of stable interactions between RF and beta LG, as well as beta CN.
CELL BIOCHEMISTRY AND BIOPHYSICS
(2023)
Review
Biochemistry & Molecular Biology
Chunhui Li, Chunhong Wang
Summary: Endometrial stromal tumors (ESTs) encompass various subtypes, including low-grade and high-grade endometrial stromal sarcomas. Studies have investigated the molecular characteristics of these tumors and identified potential therapeutic targets.
JOURNAL OF ZHEJIANG UNIVERSITY-SCIENCE B
(2021)
Article
Chemistry, Physical
Xiao-Zhong Chen, Qiu-Yang Huang, Xiu-Yan Yu, Chen Dai, Yan Shen, Zhi-Hua Lin
Summary: This study utilized 3D modeling methods to analyze the molecular structures of PKC zeta inhibitors and determine their structural requirements. The CoMFA and CoMSIA models demonstrated good statistical robustness and high external predictability. Through homology modeling and molecular docking, the binding mode and structural requirements of PKC zeta inhibitors were revealed.
JOURNAL OF MOLECULAR STRUCTURE
(2021)
Article
Chemistry, Inorganic & Nuclear
B. B. Sahoo, V. S. Pandey, A. S. Dogonchi, D. N. Thatoi, N. Nayak, M. K. Nayak
Summary: Nowadays, borophene and related materials have attracted significant interest due to their distinctive properties. Borophene is considered as the most promising material in various applications such as energy, sensor, and biomedical fields. It has been used in the preparation of high-performance supercapacitors due to its superior flexibility, capacitance, and conductivity compared to graphene. This study aims to explore the literature on the synthesis, stability, and characteristic properties of borophene and related materials using experimental methods, in order to utilize them in the production of high-performance supercapacitors. The findings reveal that synthesizing borophene from various crystallographic structures of boron can provide new insights for its large-scale implementation. Raman spectroscopy and zeta potential analysis are employed for the structural and stability analysis of borophene and its associated materials. In particular, the PANI: α-borophene nano network electrode exhibits high specific capacity and good stability for supercapacitors.
INORGANIC CHEMISTRY COMMUNICATIONS
(2023)
Article
Chemistry, Physical
Atailson Oliveira da Silva, Marcelo Oliveira Rodrigues, Marcelo Henrique Sousa, Alex Fabiano Cortez Campos
Summary: This study investigated the pH-dependent surface properties of hydrophilic nitrogen-doped carbon dots prepared through a hydrothermal method. The results show that pH plays a crucial role in controlling the colloidal stability and optical properties of N-Cdots.
COLLOIDS AND SURFACES A-PHYSICOCHEMICAL AND ENGINEERING ASPECTS
(2021)
Article
Biochemistry & Molecular Biology
Yuka Tanaka-Takemura, Yoshinori Arisaka, Masahiro Hakariya, Hiroki Masuda, Ryo Mikami, Ruriko Sekiya-Aoyama, Takanori Iwata, Tetsuya Yoda, Takashi Ono, Nobuhiko Yui
Summary: Surface properties of biomaterials, such as zeta potential and molecular mobility, play important roles in influencing macrophage responses. The zeta potential affects the initial spreading of cells, while molecular mobility governs the subsequent spreading process. Molecular mobility is the main factor modulating the inflammatory activity in macrophages.
MACROMOLECULAR BIOSCIENCE
(2022)
Article
Biochemistry & Molecular Biology
Wan-Xuan Ho, Wen-Ting Chen, Chih-Hsuan Lien, Hsin-Yu Yang, Kuan-Hung Chen, Yu-Fan Wei, Meng-Han Wang, I-Ting Ko, Fan-Gang Tseng, Hsien-Sheng Yin
Summary: Chitosan-coated alginate microparticles were developed as a carrier for bovine serum albumin (BSA) or porcine IL-1 beta (pIL-1 beta), and their physical, chemical, and biological properties were evaluated. The coated microparticles showed sustained release and enhanced bio-activity, making them a potential adjuvant for pig vaccine formulations.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Biochemistry & Molecular Biology
Grzegorz Czernel, Dominika Bloch, Arkadiusz Matwijczuk, Jolanta Ciesla, Monika Kedzierska-Matysek, Mariusz Florek, Mariusz Gagos
Summary: The study synthesized silver nanoparticles using different concentrations of honey solutions, with the 20% honey solution inhibiting nanoparticle synthesis at 35 degrees Celsius. Among the variants, AgNPs-H2 exhibited the strongest antifungal activity, while AgNPs-H10 and AgNPs-H20 showed no activity or even stimulated fungal growth.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Chemistry, Physical
Abdul Rehman, Mehr Un Nisa, Muhammad Usman, Zahoor Ahmad, Tanveer Hussain Bokhari, Hafiz Muhammad Abd Ur Rahman, Aamir Rasheed, Laraib Kiran
Summary: The challenge of improving the solubility of hydrophobic organic compounds can be addressed using micellar solutions of surfactants. Research has shown that a blend of different surfactants can synergistically enhance the dye partitioning, leading to improved stability and solubility of the dye in water. The processes of surfactant micellization, counterion binding, and dye partitioning have been found to be spontaneous.
JOURNAL OF MOLECULAR LIQUIDS
(2021)
Article
Chemistry, Multidisciplinary
Akihisa Miyagawa, Kenta Hagiya, Shigenori Nagatomo, Kiyoharu Nakatani
Summary: This study investigates the adsorption behavior of proteins on polystyrene microparticles and reveals that the behavior varies according to the method of detection. The formation of a hard corona and a soft corona is also observed, with the extent depending on the pH of the solution.
BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN
(2023)
Article
Chemistry, Applied
H. T. Kristensen, M. Christensen, M. S. Hansen, M. Hammershoj, T. K. Dalsgaard
Summary: The interactions between pea protein and whey protein isolates are a synergism of electrostatic interactions and disulphide bonds, with beta-lactoglobulin and legumin playing a significant role. The use of NEM and NaCl reagents significantly impacts these interactions, while SDS has no effect.
Article
Spectroscopy
Elise Clave, Michael Gaft, Vincent Motto-Ros, Cecile Fabre, Olivier Forni, Olivier Beyssac, Sylvestre Maurice, Roger C. Wiens, Bruno Bousquet
Summary: In the context of LIBS, adjusting temporal acquisition parameters can lead to the observation of PIL. PIL provides valuable information on minor elements in a sample but can also damage the sample due to laser ablation. The proposed experimental approach involves generating a laser-induced plasma on a separate ablation target to protect the luminescent sample, enabling further study of PIL excitation mechanisms and luminescence features with short decay times.
SPECTROCHIMICA ACTA PART B-ATOMIC SPECTROSCOPY
(2021)
Article
Chemistry, Physical
Amalendu Pal, Renu Punia, Gyan Prakash Dubey
Summary: The micellization behavior of a biamphiphilic surface-active ionic liquid mixed with an anionic surfactant was studied using various techniques, revealing synergistic and antagonistic interactions in the system. The effectiveness of mixtures in reducing surface tension was found to be less, with mixed micelle formation depending on micellar composition.
JOURNAL OF MOLECULAR LIQUIDS
(2021)
Article
Spectroscopy
Xiangrong Li, Linyu Han, Zhizhi Song, Ruonan Xu, Lixia Wang
Summary: This study investigates the interaction between transferrin and flavonols under physiological conditions using experimental and computational approaches. The results show that there is a static quenching mechanism between transferrin and flavonols with moderate affinity and binding constants ranging from 103-104 L/mol. The interaction is driven by both enthalpy and entropy, and the main force types involved include hydrophobic interaction, electrostatic force, and hydrogen bonds. These findings are important for understanding the potential and mechanism of flavonols as targeted cancer drugs.
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY
(2023)
Article
Pharmacology & Pharmacy
Nooshin Abdollahpour, Vahid Soheili, Mohammad Reza Saberi, Jamshidkhan Chamani
EUROPEAN JOURNAL OF DRUG METABOLISM AND PHARMACOKINETICS
(2016)
Article
Biochemistry & Molecular Biology
Shamim Rashidipour, Samane Naeeminejad, Jamshidkhan Chamani
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
(2016)
Article
Biochemistry & Molecular Biology
Samane Naeeminejad, Reza Assaran Darban, Sima Beigoli, Mohammad Reza Saberi, Jamshidkhan Chamani
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
(2017)
Article
Chemistry, Medicinal
Parvin Tavanaei, Mehdi Pordel, Jamshidkhan Chamani
PHARMACEUTICAL CHEMISTRY JOURNAL
(2016)
Article
Chemistry, Physical
Reyhaneh Rahmani, Mohsen Gharanfoli, Mehran Gholamin, Majid Darroudi, Jamshidkhan Chamani, Kayvan Sadri
JOURNAL OF MOLECULAR STRUCTURE
(2019)
Article
Biochemistry & Molecular Biology
Farzaneh Sadeghzadeh, Amir Arsalan Entezari, Kiana Behzadian, Kimia Habibi, Zeinab Amiri-Tehranizadeh, Ahmad Asoodeh, Mohammad Reza Saberi, Jamshidkhan Chamani
PROTEIN AND PEPTIDE LETTERS
(2020)
Article
Biochemistry & Molecular Biology
Najmeh Zare-Feizabadi, Zeinab Amiri-Tehranizadeh, Atena Sharifi-Rad, Parisa Mokaberi, Niknaz Nosrati, Fatemeh Hashemzadeh, Hamid Reza Rahimi, Mohammad Reza Saberi, Jamshidkhan Chamani
Summary: The interaction between calf thymus DNA and anastrozole was studied, indicating a potential intercalative binding mode. The presence of histone H1 increased the Stern-Volmer quenching constant, showing exothermic binding behavior. Hydrogen bonds and hydrophobic contributions play significant roles in anastrozole association with DNA, potentially inhibiting cell proliferation.
DNA AND CELL BIOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Soroush Behjati Hosseini, Maryam Asadzadeh-Lotfabad, Maryam Erfani, Fatemeh Babayan-Mashhadi, Parisa Mokaberi, Zeinab Amiri-Tehranizadeh, Mohammad Reza Saberi, Jamshidkhan Chamani
Summary: Through experimental results and molecular modeling, the binding of CUR to HSA, HTF, and (HSA-HTF) was studied, revealing negative thermodynamic parameters at different temperatures, confirming the significant roles of hydrogen bonding and van der-Waals forces in complex formation and showing different interaction behaviors between HSA-HTF complex and CUR in a ternary system compared to a binary system.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
(2022)
Article
Chemistry, Multidisciplinary
Vida Reyhani, Saeid Zibaee, Parisa Mokaberi, Zeinab Amiri-Tehranizadeh, Fatemeh Babayan-Mashhadi, Jamshidkhan Chamani
Summary: The study demonstrated that lactoferrin (LF) extracted from camel milk can be purified and loaded onto calcium alginate (Alg) hydrogel particles, significantly promoting the growth of MG63 osteoblast cells. The most significant interaction between LF and Alg was observed at pH 8.
JOURNAL OF THE IRANIAN CHEMICAL SOCIETY
(2022)
Article
Chemistry, Analytical
Narges Marjani, Maryam Dareini, Maryam Asadzade-Lotfabad, Mahtab Pejhan, Parisa Mokaberi, Zeinab Amiri-Tehranizadeh, Mohammad Reza Saberi, Jamshidkhan Chamani
Summary: This study investigated the interaction between PPF and calf thymus DNA (ct DNA) in the absence or presence of histone H1 using multiple spectroscopic techniques. PPF showed high binding affinity towards ct DNA in binary and ternary systems, with intercalation binding mode suggested by fluorescence quenching data and thermodynamic parameters. MD simulation suggested that PPF as an intercalating agent can distort the DNA structure.
Article
Chemistry, Multidisciplinary
Sara Ezazi-Toroghi, Sana Abdul-Jabbar Ali, Dmitry Olegovich Bokov, Maryam Dareini, Malihe Bahadori, Parisa Mokaberi, Zeinab Amiri-Tehranizadeh, Mohammad Reza Saberi, Jamshidkhan Chamani
Summary: This study investigated the interaction between glycated HSA and Met, and observed the impact of AgNPs on the interaction. The results showed that the presence of AgNPs caused conformational changes in the binding of Met to gHSA, leading to the formation of a larger species. The stability and heat behavior of HSA and gHSA were also affected by the presence of AgNPs.
JOURNAL OF THE IRANIAN CHEMICAL SOCIETY
(2022)
Article
Chemistry, Analytical
Fateme Kalhori, Helya Yazdyani, Fatemeh Khademorezaeian, Negar Hamzkanloo, Parisa Mokaberi, Sare Hosseini, Jamshidkhan Chamani
Summary: In this study, cellulose nanocrystals (CNCs) were successfully extracted from Citrus medica L. pericarp using alkaline pretreatment and two-step bleaching. The extracted CNCs showed good morphological properties, no cytotoxic effects, and interaction with HMG-CoA reductase.
Article
Chemistry, Multidisciplinary
Sattar Khashkhashi-Moghadam, Samane Soleimani, Aileen Bazanjani, Saeideh Hoseinpoor, Reza Taheri, Parisa Mokaberi, Mohammad Reza Saberi, Jamshidkhan Chamani
Summary: Cellulose nanocrystals (CNCs) have gained increasing interest in drug delivery due to their low cost, biodegradability, and biocompatibility. This study synthesized and characterized CNCs loaded with tamoxifen (CNCs/TMX) to evaluate their binding mechanism to serum proteins. The results showed that CNCs can deliver small amounts of TMX to tumors over time, limiting dose-dependent toxicity. The findings from various analyses confirmed the structure and properties of CNCs/TMX and the formation of complexes with serum proteins. Furthermore, in vitro and in silico studies demonstrated the anticancer effects and conformational changes of carrier proteins in the presence of CNCs/TMX.
NEW JOURNAL OF CHEMISTRY
(2023)
Article
Pharmacology & Pharmacy
Atena Sharifi-Rad, Zeinab Amiri-Tehranizadeh, Atiye Talebi, Niknaz Nosrati, Morvarid Medalian, Mahtab Pejhan, Nazanin Hamzkanloo, Mohammad Reza Saberi, Parisa Mokaberi, Jamshidkhan Chamani
Summary: The interaction behavior between propyl acridones and calf thymus DNA was investigated, demonstrating intercalation of PA with ct-DNA and significant effects on DNA stability and conformation. The binding constants and thermodynamic parameters revealed multiple non-covalent interactions in the binding process. Additionally, molecular dynamics simulations supported the stability of DNA with increased concentrations of PA.
Article
Chemistry, Multidisciplinary
Parisa Mokaberi, Vida Reyhani, Zeinab Amiri-Tehranizadeh, Mohammad Reza Saberi, Sima Beigoli, Farzaneh Samandar, Jamshidkhan Chamani
NEW JOURNAL OF CHEMISTRY
(2019)