The microbiome of the urinary tract—a role beyond infection

Effects of Antibiotics on Human Microbiota and Subsequent Disease

(2014) Kristie M. Keeney et al.   Annual Review of Microbiology

Selective Target Inactivation Rather than Global Metabolic Dormancy Causes Antibiotic Tolerance in Uropathogens

(2014) Lee W. Goneau et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Microbiota of Human Breast Tissue

(2014) Camilla Urbaniak et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Fire Within: Microbes Inflame Tumors

(2014) Nicola Gagliani et al.   CELL

The Virome in Mammalian Physiology and Disease

(2014) Herbert W. Virgin   CELL

Probiotic Administration Attenuates Myocardial Hypertrophy and Heart Failure After Myocardial Infarction in the Rat

(2014) Xiaohong Tracey Gan et al.   Circulation-Heart Failure

Fecal Microbiota Transplant for Relapsing Clostridium difficile Infection Using a Frozen Inoculum From Unrelated Donors: A Randomized, Open-Label, Controlled Pilot Study

(2014) Ilan Youngster et al.   CLINICAL INFECTIOUS DISEASES

Anti-Infective Activities of Lactobacillus Strains in the Human Intestinal Microbiota: from Probiotics to Gastrointestinal Anti-Infectious Biotherapeutic Agents

(2014) V. Lievin-Le Moal et al.   CLINICAL MICROBIOLOGY REVIEWS

The Multifaceted Role of the Intestinal Microbiota in Colon Cancer

(2014) Thergiory Irrazábal et al.   MOLECULAR CELL

Structural changes in the gut microbiome of constipated patients

(2014) Lixin Zhu et al.   PHYSIOLOGICAL GENOMICS

Lactobacillus crispatus Dominant Vaginal Microbiome Is Associated with Inhibitory Activity of Female Genital Tract Secretions against Escherichia coli

(2014) Jeny P. Ghartey et al.   PLoS One

The Placenta Harbors a Unique Microbiome

(2014) K. Aagaard et al.   Science Translational Medicine

Single Clinical Isolates from Acute Uncomplicated Urinary Tract Infections Are Representative of Dominant In Situ Populations

(2014) D. Willner et al.   mBio

The Female Urinary Microbiome: a Comparison of Women with and without Urgency Urinary Incontinence

(2014) M. M. Pearce et al.   mBio

Human Microbiota Characterization in the Course of Renal Transplantation

(2013) W. F. Fricke et al.   AMERICAN JOURNAL OF TRANSPLANTATION

Effect of anticoagulants and antiplatelet agents on the efficacy of intravesical BCG treatment of bladder cancer: A systematic review

(2013) Nader Fahmy et al.   CUAJ-Canadian Urological Association Journal

Bringing the gut microbiota into focus through microbial culture: recent progress and future perspective

(2013) Emma Allen-Vercoe   CURRENT OPINION IN MICROBIOLOGY

Urinary Tract Infection Pathogenesis

(2013) Ann E. Stapleton   INFECTIOUS DISEASE CLINICS OF NORTH AMERICA

Urine Is Not Sterile: Use of Enhanced Urine Culture Techniques To Detect Resident Bacterial Flora in the Adult Female Bladder

(2013) E. E. Hilt et al.   JOURNAL OF CLINICAL MICROBIOLOGY

High throughput sequencing methods and analysis for microbiome research

(2013) Julia M. Di Bella et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Emergency Department Visits in the United States for Upper Urinary Tract Stones: Trends in Hospitalization and Charges

(2013) Khurshid R. Ghani et al.   JOURNAL OF UROLOGY

The role of Oxalobacter formigenes colonization in calcium oxalate stone disease

(2013) Roswitha Siener et al.   KIDNEY INTERNATIONAL

A gut prediction

(2013) Willem M. de Vos et al.   NATURE

Brain Microbial Populations in HIV/AIDS: α-Proteobacteria Predominate Independent of Host Immune Status

(2013) William G. Branton et al.   PLoS One

Occurrence and partitioning of antibiotic compounds found in the water column and bottom sediments from a stream receiving two wastewater treatment plant effluents in Northern New Jersey, 2008

(2013) Jacob Gibs et al.   SCIENCE OF THE TOTAL ENVIRONMENT

The Colon: An Overlooked Site for Therapeutics in Dialysis Patients

(2013) Ruben Poesen et al.   SEMINARS IN DIALYSIS

Microbiota impact on the epigenetic regulation of colorectal cancer

(2013) Tao Yang et al.   TRENDS IN MOLECULAR MEDICINE

Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis

(2013) Jose U Scher et al.   eLife

The human urinary microbiome; bacterial DNA in voided urine of asymptomatic adults

(2013) Debbie A. Lewis et al.   Frontiers in Cellular and Infection Microbiology

The genetic composition of Oxalobacter formigenes and its relationship to colonization and calcium oxalate stone disease

(2013) John Knight et al.   Urolithiasis

Bioremediation and Tolerance of Humans to Heavy Metals through Microbial Processes: a Potential Role for Probiotics?

(2012) Marc Monachese et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Immediate versus conditional treatment of uncomplicated urinary tract infection - a randomized-controlled comparative effectiveness study in general practices

(2012) Ildikó Gágyor et al.   BMC INFECTIOUS DISEASES

Alterations of microbiota in urine from women with interstitial cystitis

(2012) Huma Siddiqui et al.   BMC MICROBIOLOGY

Transfer of Intestinal Microbiota From Lean Donors Increases Insulin Sensitivity in Individuals With Metabolic Syndrome

(2012) Anne Vrieze et al.   GASTROENTEROLOGY

Evidence of Uncultivated Bacteria in the Adult Female Bladder

(2012) A. J. Wolfe et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Target Selectivity of FimH Antagonists

(2012) Meike Scharenberg et al.   JOURNAL OF MEDICINAL CHEMISTRY

Broad Identification of Bacterial Type in Urinary Tract Infection Using 1H NMR Spectroscopy

(2012) Ashish Gupta et al.   JOURNAL OF PROTEOME RESEARCH

Integrated next-generation sequencing of 16S rDNA and metaproteomics differentiate the healthy urine microbiome from asymptomatic bacteriuria in neuropathic bladder associated with spinal cord injury

(2012) Derrick E Fouts et al.   Journal of Translational Medicine

Global burden of cancers attributable to infections in 2008: a review and synthetic analysis

(2012) Catherine de Martel et al.   LANCET ONCOLOGY

Recurrent Urinary Tract Infection and Urinary Escherichia coli in Women Ingesting Cranberry Juice Daily: A Randomized Controlled Trial

(2012) Ann E. Stapleton et al.   MAYO CLINIC PROCEEDINGS

1H NMR-based metabolic profiling of urinary tract infection: combining multiple statistical models and clinical data

(2012) Ekaterina Nevedomskaya et al.   Metabolomics

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour

(2012) John F. Cryan et al.   NATURE REVIEWS NEUROSCIENCE

Defining the human microbiome

(2012) Luke K Ursell et al.   NUTRITION REVIEWS

Bacterial Communities of the Coronal Sulcus and Distal Urethra of Adolescent Males

(2012) David E. Nelson et al.   PLoS One

Adhesion of Lactobacillus iners AB-1 to Human Fibronectin

(2012) Amy McMillan et al.   Reproductive Sciences

Temporal Dynamics of the Human Vaginal Microbiota

(2012) P. Gajer et al.   Science Translational Medicine

Bacillus Calmette-Guérin Induces Cellular Reactive Oxygen Species and Lipid Peroxidation in Cancer Cells

(2012) Juwita N. Rahmat et al.   UROLOGY

Distinguishing the common components of oil- and water-based metalworking fluids for assessment of cancer incidence risk in autoworkers

(2011) Melissa C. Friesen et al.   AMERICAN JOURNAL OF INDUSTRIAL MEDICINE

Assessing diversity of the female urine microbiota by high throughput sequencing of 16S rDNA amplicons

(2011) Huma Siddiqui et al.   BMC MICROBIOLOGY

Metagenomics and Personalized Medicine

(2011) Herbert W. Virgin et al.   CELL

Randomized, Placebo-Controlled Phase 2 Trial of a Lactobacillus crispatus Probiotic Given Intravaginally for Prevention of Recurrent Urinary Tract Infection

(2011) Ann E. Stapleton et al.   CLINICAL INFECTIOUS DISEASES

Epidemiology of Renal Cell Cancer

(2011) Eunyoung Cho et al.   HEMATOLOGY-ONCOLOGY CLINICS OF NORTH AMERICA

Factors Related to Colonization with Oxalobacter formigenes in U.S. Adults

(2011) Judith Parsells Kelly et al.   JOURNAL OF ENDOUROLOGY

Variation in Antibiotic-Induced Microbial Recolonization Impacts on the Host Metabolic Phenotypes of Rats

(2011) Jonathan R. Swann et al.   JOURNAL OF PROTEOME RESEARCH

Impact of Dietary Calcium and Oxalate, and Oxalobacter Formigenes Colonization on Urinary Oxalate Excretion

(2011) Juquan Jiang et al.   JOURNAL OF UROLOGY

Human nutrition, the gut microbiome and the immune system

(2011) Andrew L. Kau et al.   NATURE

Genetics of innate immunity and UTI susceptibility

(2011) Bryndís Ragnarsdóttir et al.   Nature Reviews Urology

The microbiome-gut-brain axis: from bowel to behavior

(2011) J. F. Cryan et al.   NEUROGASTROENTEROLOGY AND MOTILITY

The Microbial Communities in Male First Catch Urine Are Highly Similar to Those in Paired Urethral Swab Specimens

(2011) Qunfeng Dong et al.   PLoS One

Vaginal Microbiome and Epithelial Gene Array in Post-Menopausal Women with Moderate to Severe Dryness

(2011) Ruben Hummelen et al.   PLoS One

Enteric oxalate elimination is induced and oxalate is normalized in a mouse model of primary hyperoxaluria following intestinal colonization with Oxalobacter

(2010) Marguerite Hatch et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

The Gut: The Forgotten Organ in Uremia?

(2010) Eva Schepers et al.   BLOOD PURIFICATION

Symptomatic treatment (ibuprofen) or antibiotics (ciprofloxacin) for uncomplicated urinary tract infection? - Results of a randomized controlled pilot trial

(2010) Jutta Bleidorn et al.   BMC Medicine

Diet, but not oral probiotics, effectively reduces urinary oxalate excretion and calcium oxalate supersaturation

(2010) John C. Lieske et al.   KIDNEY INTERNATIONAL

Probiotics and dietary manipulations in calcium oxalate nephrolithiasis: two sides of the same coin?

(2010) Loris Borghi et al.   KIDNEY INTERNATIONAL

Microbiota restoration: natural and supplemented recovery of human microbial communities

(2010) Gregor Reid et al.   NATURE REVIEWS MICROBIOLOGY

Gut Microbiota in Health and Disease

(2010) Inna Sekirov et al.   PHYSIOLOGICAL REVIEWS

Gut Microbiota in Human Adults with Type 2 Diabetes Differs from Non-Diabetic Adults

(2010) Nadja Larsen et al.   PLoS One

Characteristic Male Urine Microbiomes Associate with Asymptomatic Sexually Transmitted Infection

(2010) David E. Nelson et al.   PLoS One

Probiotic-induced reduction of gastrointestinal oxalate absorption in healthy subjects

(2010) Joseph Okombo et al.   UROLOGICAL RESEARCH

Intestinal Colonization with Oxalobacter formigenes and its Relation to Urinary Oxalate Excretion in Pediatric Patients with Idiopathic Calcium Urolithiasis

(2009) Przemysław Sikora et al.   ARCHIVES OF MEDICAL RESEARCH

Probiotics prevent IgE-associated allergy until age 5 years in cesarean-delivered children but not in the total cohort

(2009) Mikael Kuitunen et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Metagenomic study of the oral microbiota by Illumina high-throughput sequencing

(2009) Vladimir Lazarevic et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Uremic toxins originating from colonic microbial metabolism

(2009) Pieter Evenepoel et al.   KIDNEY INTERNATIONAL

Topographical and Temporal Diversity of the Human Skin Microbiome

(2009) E. A. Grice et al.   SCIENCE

Effects of Lactobacillus casei and Bifidobacterium breve on urinary oxalate excretion in nephrolithiasis patients

(2009) Renato Ribeiro Nogueira Ferraz et al.   UROLOGICAL RESEARCH

Microbiological and clinical features of Corynebacterium urealyticum: urinary tract stones and genomics as the Rosetta Stone

(2008) F. Soriano et al.   CLINICAL MICROBIOLOGY AND INFECTION

The advantage of women in cancer survival: An analysis of EUROCARE-4 data

(2008) A. Micheli et al.   EUROPEAN JOURNAL OF CANCER

Expression of chemokine/cytokine genes and immune cell recruitment following the instillation of Mycobacterium bovis, bacillus Calmette–Guérin or Lactobacillus rhamnosus strain GG in the healthy murine bladder

(2008) Shih Wee Seow et al.   IMMUNOLOGY

The Commensal Streptococcus salivarius K12 Downregulates the Innate Immune Responses of Human Epithelial Cells and Promotes Host-Microbe Homeostasis

(2008) C. Cosseau et al.   INFECTION AND IMMUNITY

Mycoplasma and ureaplasma colonisation in women with lower urinary tract symptoms

(2008) P. M. Latthe et al.   JOURNAL OF OBSTETRICS AND GYNAECOLOGY

Oxalobacter formigenes May Reduce the Risk of Calcium Oxalate Kidney Stones

(2008) D. W. Kaufman et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE

Lactobacillus colonization status in infants with urinary tract infection

(2008) Jung Won Lee et al.   PEDIATRIC NEPHROLOGY