Optimized DNA extraction and metagenomic sequencing of airborne microbial communities

Inhalable Microorganisms in Beijing’s PM2.5 and PM10 Pollutants during a Severe Smog Event

(2014) Chen Cao et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

A microbial ecosystem beneath the West Antarctic ice sheet

(2014) Brent C. Christner et al.   NATURE

Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics

(2014) Christian Rinke et al.   Nature Protocols

Culture-Independent Analysis of Aerosol Microbiology in a Metropolitan Subway System

(2013) Charles E. Robertson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Seasonal Variability in Bacterial and Fungal Diversity of the Near-Surface Atmosphere

(2013) Robert M. Bowers et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Computational meta'omics for microbial community studies

(2013) N. Segata et al.   Molecular Systems Biology

Microbiome of the upper troposphere: Species composition and prevalence, effects of tropical storms, and atmospheric implications

(2013) N. DeLeon-Rodriguez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal variability and effect of environmental variables on airborne bacterial communities in an urban area of Northern Italy

(2012) Valentina Bertolini et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metagenomic microbial community profiling using unique clade-specific marker genes

(2012) Nicola Segata et al.   NATURE METHODS

Comparative Metagenomics of Toxic Freshwater Cyanobacteria Bloom Communities on Two Continents

(2012) Morgan M. Steffen et al.   PLoS One

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

(2012) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Quantifying the Air Pollutants Emission Reduction during the 2008 Olympic Games in Beijing

(2010) Shuxiao Wang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments

(2010) Robert M Bowers et al.   ISME Journal

Genomic and functional adaptation in surface ocean planktonic prokaryotes

(2010) Shibu Yooseph et al.   NATURE

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Molecular and morphological characterization of cyanobacterial diversity in the stromatolites of Highborne Cay, Bahamas

(2009) Jamie S Foster et al.   ISME Journal

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks

(2008) David A Nix et al.   BMC BIOINFORMATICS