Comparing the performance of biomedical clustering methods

Clustering by fast search and find of density peaks

(2014) A. Rodriguez et al.   SCIENCE

Density parameter estimation for finding clusters of homologous proteins—tracing actinobacterial pathogenicity lifestyles

(2012) Richard Röttger et al.   BIOINFORMATICS

Detecting overlapping protein complexes in protein-protein interaction networks

(2012) Tamás Nepusz et al.   NATURE METHODS

Comprehensive cluster analysis with Transitivity Clustering

(2011) Tobias Wittkop et al.   Nature Protocols

Integrated Genomic Analysis Identifies Clinically Relevant Subtypes of Glioblastoma Characterized by Abnormalities in PDGFRA, IDH1, EGFR, and NF1

(2010) Roel G.W. Verhaak et al.   CANCER CELL

Partitioning biological data with transitivity clustering

(2010) Tobias Wittkop et al.   NATURE METHODS

Word sense disambiguation

(2009) Roberto Navigli   ACM COMPUTING SURVEYS

A roadmap of clustering algorithms: finding a match for a biomedical application

(2009) B. Andreopoulos et al.   BRIEFINGS IN BIOINFORMATICS

Techniques for clustering gene expression data

(2007) G. Kerr et al.   COMPUTERS IN BIOLOGY AND MEDICINE

Robust path-based spectral clustering

(2007) Hong Chang et al.   PATTERN RECOGNITION

MAMMOTH (Matching molecular models obtained from theory): An automated method for model comparison

(2002) Angel R. Ortiz et al.   PROTEIN SCIENCE