Comparative faecal microbiota of dogs with and without calcium oxalate stones

Presence of Oxalobacter formigenes in the intestinal tract is associated with the absence of calcium oxalate urolith formation in dogs

(2012) Josephine S. Gnanandarajah et al.   UROLOGICAL RESEARCH

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Efficacy and safety of Oxalobacter formigenes to reduce urinary oxalate in primary hyperoxaluria

(2011) B. Hoppe et al.   NEPHROLOGY DIALYSIS TRANSPLANTATION

Robust Computational Analysis of rRNA Hypervariable Tag Datasets

(2011) Maksim Sipos et al.   PLoS One

Metatranscriptomic Approach to Analyze the Functional Human Gut Microbiota

(2011) María José Gosalbes et al.   PLoS One

Modulations of the Chicken Cecal Microbiome and Metagenome in Response to Anticoccidial and Growth Promoter Treatment

(2011) Jessica L. Danzeisen et al.   PLoS One

Oxalate-degrading capacities of lactic acid bacteria in canine feces

(2011) Zhihua Ren et al.   VETERINARY MICROBIOLOGY

Longitudinal investigation of the age-related bacterial diversity in the feces of commercial pigs

(2011) Hyeun Bum Kim et al.   VETERINARY MICROBIOLOGY

Oxalate-Degrading Activity in Bifidobacterium animalis subsp. lactis: Impact of Acidic Conditions on the Transcriptional Levels of the Oxalyl Coenzyme A (CoA) Decarboxylase and Formyl-CoA Transferase Genes

(2010) S. Turroni et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice

(2010) Kelly S Swanson et al.   ISME Journal

Identification and Characterization of Oxalate Oxidoreductase, a Novel Thiamine Pyrophosphate-dependent 2-Oxoacid Oxidoreductase That Enables Anaerobic Growth on Oxalate

(2010) Elizabeth Pierce et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Phylogenetic Characterization of Fecal Microbial Communities of Dogs Fed Diets with or without Supplemental Dietary Fiber Using 454 Pyrosequencing

(2010) Ingmar S. Middelbos et al.   PLoS One

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

The effect of the macrolide antibiotic tylosin on microbial diversity in the canine small intestine as demonstrated by massive parallel 16S rRNA gene sequencing

(2009) Jan S Suchodolski et al.   BMC MICROBIOLOGY

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

(2009) M. Hamady et al.   GENOME RESEARCH

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

(2009) Micah Hamady et al.   ISME Journal

Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine

(2009) Marcus J. Claesson et al.   PLoS One

A High-Throughput DNA Sequence Aligner for Microbial Ecology Studies

(2009) Patrick D. Schloss   PLoS One

Presence of Oxalobacter formigenes in the stool of healthy dogs

(2009) J. Scott Weese et al.   VETERINARY MICROBIOLOGY

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

(2009) James Robert White et al.   PLoS Computational Biology

A statistical toolbox for metagenomics: assessing functional diversity in microbial communities

(2008) Patrick D Schloss et al.   BMC BIOINFORMATICS

Molecular-phylogenetic characterization of microbial communities imbalances in the small intestine of dogs with inflammatory bowel disease

(2008) Panagiotis G. Xenoulis et al.   FEMS MICROBIOLOGY ECOLOGY

Oxalobacter formigenes May Reduce the Risk of Calcium Oxalate Kidney Stones

(2008) D. W. Kaufman et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Worlds within worlds: evolution of the vertebrate gut microbiota

(2008) Ruth E. Ley et al.   NATURE REVIEWS MICROBIOLOGY

Evolution of Mammals and Their Gut Microbes

(2008) R. E. Ley et al.   SCIENCE

Analysis of 451,891 Canine Uroliths, Feline Uroliths, and Feline Urethral Plugs from 1981 to 2007: Perspectives from the Minnesota Urolith Center

(2008) Carl A. Osborne et al.   VETERINARY CLINICS OF NORTH AMERICA-SMALL ANIMAL PRACTICE

Metabolic activity of probiotics—Oxalate degradation

(2008) C. Murphy et al.   VETERINARY MICROBIOLOGY