River organic matter shapes microbial communities in the sediment of the Rhône prodelta

Ecogeochemical fate of coarse organic particles in sediments of the Rhône River prodelta

(2014) François Charles et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Identification of acetate-oxidizing bacteria in a coastal marine surface sediment by RNA-stable isotope probing in anoxic slurries and intact cores

(2013) Verona Vandieken et al.   FEMS MICROBIOLOGY ECOLOGY

The fate of river organic carbon in coastal areas: A study in the Rhône River delta using multiple isotopic (δ 13 C, Δ 14 C) and organic tracers

(2013) C. Cathalot et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Species matter: the role of competition in the assembly of congeneric bacteria

(2013) Alexander F Koeppel et al.   ISME Journal

Microbial communities associated with the degradation of oak wood in the Blanes submarine canyon and its adjacent open slope (NW Mediterranean)

(2013) S.K. Fagervold et al.   PROGRESS IN OCEANOGRAPHY

Stochastic and deterministic assembly processes in subsurface microbial communities

(2012) James C Stegen et al.   ISME Journal

Phylogenetic Analysis Suggests That Habitat Filtering Is Structuring Marine Bacterial Communities Across the Globe

(2012) Mikael Pontarp et al.   MICROBIAL ECOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge

(2012) S. L. Jorgensen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenetic clustering increases with elevation for microbes

(2012) Jianjun Wang et al.   Environmental Microbiology Reports

The energy–diversity relationship of complex bacterial communities in Arctic deep-sea sediments

(2011) Christina Bienhold et al.   ISME Journal

Diversity and dynamics of rare and of resident bacterial populations in coastal sands

(2011) Angélique Gobet et al.   ISME Journal

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Contribution of river-borne soil organic carbon to the Gulf of Lions (NW Mediterranean)

(2011) J. -H. Kim et al.   LIMNOLOGY AND OCEANOGRAPHY

The role of terrestrially derived organic carbon in the coastal ocean: A changing paradigm and the priming effect

(2011) T. S. Bianchi   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Detecting Novel Associations in Large Data Sets

(2011) D. N. Reshef et al.   SCIENCE

Seasonal variation in stable C and N isotope ratios of the Rhone River inputs to the Mediterranean Sea (2004–2005)

(2010) M. Harmelin-Vivien et al.   BIOGEOCHEMISTRY

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

In situ record of sedimentary processes near the Rhône River mouth during winter events (Gulf of Lions, Mediterranean Sea)

(2010) C. Marion et al.   CONTINENTAL SHELF RESEARCH

Fluidized muds: a novel setting for the generation of biosphere diversity through geologic time*

(2010) J. Y. ALLER et al.   Geobiology

Microbial community resemblance methods differ in their ability to detect biologically relevant patterns

(2010) Justin Kuczynski et al.   NATURE METHODS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Syntrophy in anaerobic global carbon cycles

(2009) Michael J McInerney et al.   CURRENT OPINION IN BIOTECHNOLOGY

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylocom: software for the analysis of phylogenetic community structure and trait evolution

(2008) Campbell O. Webb et al.   BIOINFORMATICS

In situ oxygen uptake rates by coastal sediments under the influence of the Rhône River (NW Mediterranean Sea)

(2008) Bruno Lansard et al.   CONTINENTAL SHELF RESEARCH

Comparison of C and N stable isotope ratios between surface particulate organic matter and microphytoplankton in the Gulf of Lions (NW Mediterranean)

(2008) Mireille Harmelin-Vivien et al.   CONTINENTAL SHELF RESEARCH

Benthic remineralization at the land–ocean interface: A case study of the Rhône River (NW Mediterranean Sea)

(2008) Bruno Lansard et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Suspended sediment and 137Cs fluxes during the exceptional December 2003 flood in the Rhone River, southeast France

(2007) Christelle Antonelli et al.   GEOMORPHOLOGY