Protein-SIP enables time-resolved analysis of the carbon flux in a sulfate-reducing, benzene-degrading microbial consortium

Anaerobic benzene degradation under denitrifying conditions: Peptococcaceae as dominant benzene degraders and evidence for a syntrophic process

(2012) Bas M. van der Zaan et al.   ENVIRONMENTAL MICROBIOLOGY

Exploring the limits of robust detection of incorporation of 13C by mass spectrometry in protein-based stable isotope probing (protein-SIP)

(2011) Martin Taubert et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus

(2011) Dawn E. Holmes et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects of hydrogen and acetate on benzene mineralisation under sulphate-reducing conditions

(2011) Jana Rakoczy et al.   FEMS MICROBIOLOGY ECOLOGY

Time resolved protein-based stable isotope probing (Protein-SIP) analysis allows quantification of induced proteins in substrate shift experiments

(2011) Martin Taubert et al.   PROTEOMICS

Metabolic Flexibility of Sulfate-Reducing Bacteria

(2011) Caroline M. Plugge et al.   Frontiers in Microbiology

Anaerobic benzene degradation by bacteria

(2011) Carsten Vogt et al.   Microbial Biotechnology

DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment

(2010) Christian Winderl et al.   ISME Journal

Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction

(2010) Robert M Morris et al.   ISME Journal

Protein-based stable isotope probing

(2010) Nico Jehmlich et al.   Nature Protocols

When metagenomics meets stable-isotope probing: progress and perspectives

(2010) Yin Chen et al.   TRENDS IN MICROBIOLOGY

Improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments

(2009) Dirk Benndorf et al.   BIODEGRADATION

Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing

(2009) Steffi Herrmann et al.   ENVIRONMENTAL MICROBIOLOGY

Enrichment of anaerobic benzene-degrading microorganisms by in situ microcosms

(2009) Steffi Herrmann et al.   FEMS MICROBIOLOGY ECOLOGY

Community proteogenomics reveals insights into the physiology of phyllosphere bacteria

(2009) N. Delmotte et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Molecular characterization of bacterial communities mineralizing benzene under sulfate-reducing conditions

(2008) Sabine Kleinsteuber et al.   FEMS MICROBIOLOGY ECOLOGY

The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota

(2008) T. Kosaka et al.   GENOME RESEARCH

Protein-based stable isotope probing (Protein-SIP) reveals active species within anoxic mixed cultures

(2008) Nico Jehmlich et al.   ISME Journal

Incorporation of carbon and nitrogen atoms into proteins measured by protein-based stable isotope probing (Protein-SIP)

(2008) Nico Jehmlich et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY