Protein costs do not explain evolution of metabolic strategies and regulation of ribosomal content: does protein investment explain an anaerobic bacterial Crabtree effect?

Bacterial growth: global effects on gene expression, growth feedback and proteome partition

(2014) Stefan Klumpp et al.   CURRENT OPINION IN BIOTECHNOLOGY

Regulation of Acetate Kinase Isozymes and Its Importance for Mixed-Acid Fermentation in Lactococcus lactis

(2014) P. Puri et al.   JOURNAL OF BACTERIOLOGY

Systematic identification of tRNAome and its dynamics inLactococcus lactis

(2014) Pranav Puri et al.   MOLECULAR MICROBIOLOGY

Acetate Kinase Isozymes Confer Robustness in Acetate Metabolism

(2014) Siu Hung Joshua Chan et al.   PLoS One

Genome-scale metabolic model for Lactococcus lactis MG1363 and its application to the analysis of flavor formation

(2013) Nicolas A. L. Flahaut et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Coordination of bacterial proteome with metabolism by cyclic AMP signalling

(2013) Conghui You et al.   NATURE

Metabolic shifts: a fitness perspective for microbial cell factories

(2012) Anisha Goel et al.   BIOTECHNOLOGY LETTERS

FAME, the Flux Analysis and Modeling Environment

(2012) Joost Boele et al.   BMC Systems Biology

Cellular Metabolism and Disease: What Do Metabolic Outliers Teach Us?

(2012) Ralph J. DeBerardinis et al.   CELL

Expression of a small (p)ppGpp synthetase, YwaC, in the (p)ppGpp0mutant ofBacillus subtilistriggers YvyD-dependent dimerization of ribosome

(2012) Kazumi Tagami et al.   MicrobiologyOpen

Standardized Assay Medium To Measure Lactococcus lactis Enzyme Activities while Mimicking Intracellular Conditions

(2011) Anisha Goel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of hibernating ribosomes in mammalian cells

(2011) Dawid Krokowski et al.   CELL CYCLE

Bacterial growth laws and their applications

(2011) Matthew Scott et al.   CURRENT OPINION IN BIOTECHNOLOGY

A flux-sensing mechanism could regulate the switch between respiration and fermentation

(2011) Daphne H. E. W. Huberts et al.   FEMS YEAST RESEARCH

Multi-omics approach to study the growth efficiency and amino acid metabolism in Lactococcus lactis at various specific growth rates

(2011) Petri-Jaan Lahtvee et al.   Microbial Cell Factories

Economics of membrane occupancy and respiro-fermentation

(2011) K. Zhuang et al.   Molecular Systems Biology

Large-scale 13C-flux analysis reveals distinct transcriptional control of respiratory and fermentative metabolism in Escherichia coli

(2011) B. R. B. Haverkorn van Rijsewijk et al.   Molecular Systems Biology

Systems biology approach reveals that overflow metabolism of acetate in Escherichia coli is triggered by carbon catabolite repression of acetyl-CoA synthetase

(2010) Kaspar Valgepea et al.   BMC Systems Biology

Physiological Adaptation of the BacteriumLactococcus lactisin Response to the Production of Human CFTR

(2010) Anton Steen et al.   MOLECULAR & CELLULAR PROTEOMICS

Cost of Unneeded Proteins in E. coli Is Reduced after Several Generations in Exponential Growth

(2010) Irit Shachrai et al.   MOLECULAR CELL

Bacterial adaptation through distributed sensing of metabolic fluxes

(2010) Oliver Kotte et al.   Molecular Systems Biology

Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

(2010) Y. Taniguchi et al.   SCIENCE

Interdependence of Cell Growth and Gene Expression: Origins and Consequences

(2010) M. Scott et al.   SCIENCE

Examination of post-transcriptional regulations in prokaryotes by integrative biology

(2009) Flora Picard et al.   COMPTES RENDUS BIOLOGIES

Formation of 100S ribosomes inStaphylococcus aureusby the hibernation promoting factor homologSaHPF

(2009) Masami Ueta et al.   GENES TO CELLS

Multi-way analysis of flux distributions across multiple conditions

(2009) Maikel P. H. Verouden et al.   JOURNAL OF CHEMOMETRICS

Shifts in growth strategies reflect tradeoffs in cellular economics

(2009) Douwe Molenaar et al.   Molecular Systems Biology

Transcriptome Analysis of the Lactococcus lactis ArgR and AhrC Regulons

(2008) R. Larsen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Growth rate regulated genes and their wide involvement in the Lactococcus lactis stress responses

(2008) Clementine Dressaire et al.   BMC GENOMICS

The Cost of Expression of Escherichia coli lac Operon Proteins Is in the Process, Not in the Products

(2008) D. M. Stoebel et al.   GENETICS

The Ser/Thr/Tyr phosphoproteome of Lactococcus lactis IL1403 reveals multiply phosphorylated proteins

(2008) Boumediene Soufi et al.   PROTEOMICS