AMAT1-2wild-type strain fromPenicillium chrysogenum: functional mating-type locus characterization, genome sequencing and mating with an industrial penicillin-producing strain

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Mating type genes and cryptic sexuality as tools for genetically manipulating industrial molds

(2013) Ulrich Kück et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Sexual reproduction and mating-type–mediated strain development in the penicillin-producing fungusPenicillium chrysogenum

(2013) Julia Böhm et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Members of the Penicillium chrysogenum Velvet Complex Play Functionally Opposing Roles in the Regulation of Penicillin Biosynthesis and Conidiation

(2012) Katarina Kopke et al.   EUKARYOTIC CELL

Mating-Type Genes and MAT Switching in Saccharomyces cerevisiae

(2012) J. E. Haber   GENETICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Sex in Fungi

(2011) Min Ni et al.   Annual Review of Genetics

High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum

(2011) Upeka Samarakoon et al.   BMC GENOMICS

Molecular organization of the mating-type loci in the homothallic Ascomycete Eupenicillium crustaceum

(2011) Stefanie Pöggeler et al.   Fungal Biology

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Genotype and SNP calling from next-generation sequencing data

(2011) Rasmus Nielsen et al.   NATURE REVIEWS GENETICS

Genome-wide survey of post-meiotic segregation during yeast recombination

(2011) Eugenio Mancera et al.   GENOME BIOLOGY

Two Components of avelvet-Like Complex Control Hyphal Morphogenesis, Conidiophore Development, and Penicillin Biosynthesis in Penicillium chrysogenum

(2010) Birgit Hoff et al.   EUKARYOTIC CELL

Conserved Regulators of Mating Are Essential for Aspergillus fumigatus Cleistothecium Formation

(2010) Edyta Szewczyk et al.   EUKARYOTIC CELL

Spotlight on Aspergillus nidulans photosensory systems

(2010) Özgür Bayram et al.   FUNGAL GENETICS AND BIOLOGY

Intercalation of a new tier of transcription regulation into an ancient circuit

(2010) Lauren N. Booth et al.   NATURE

LaeA Control of Velvet Family Regulatory Proteins for Light-Dependent Development and Fungal Cell-Type Specificity

(2010) Özlem Sarikaya Bayram et al.   PLoS Genetics

Homologous recombination in the antibiotic producer Penicillium chrysogenum: strain ΔPcku70 shows up-regulation of genes from the HOG pathway

(2009) Birgit Hoff et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

TheUstilago maydis bmating type locus controls hyphal proliferation and expression of secreted virulence factorsin planta

(2009) Ramon Wahl et al.   MOLECULAR MICROBIOLOGY

Functional and Physical Interaction of Blue- and Red-Light Sensors in Aspergillus nidulans

(2008) Janina Purschwitz et al.   CURRENT BIOLOGY

Eighty Years after Its Discovery, Fleming'sPenicilliumStrain Discloses the Secret of Its Sex

(2008) Birgit Hoff et al.   EUKARYOTIC CELL

The VeA regulatory system and its role in morphological and chemical development in fungi

(2008) Ana M. Calvo   FUNGAL GENETICS AND BIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

High-resolution mapping of meiotic crossovers and non-crossovers in yeast

(2008) Eugenio Mancera et al.   NATURE

Discovery of a sexual cycle in the opportunistic fungal pathogen Aspergillus fumigatus

(2008) Céline M. O’Gorman et al.   NATURE

Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum

(2008) Marco A van den Berg et al.   NATURE BIOTECHNOLOGY

VelB/VeA/LaeA Complex Coordinates Light Signal with Fungal Development and Secondary Metabolism

(2008) O. Bayram et al.   SCIENCE