Article
Microbiology
Yingning Wang, Fang Ma, Jixian Yang, Haijuan Guo, Delin Su
Summary: A novel species of the genus Xanthobacter, named Xanthobacter dioxanivorans sp. nov., was isolated and characterized in this study. This bacterium is capable of degrading 1,4-dioxane and exhibits a wide range of growth conditions.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Tomohiro Watanabe, Tatsuya Yabe, Jackson M. Tsuji, Manabu Fukui
Summary: A novel sulfate-reducing bacterium was isolated from sediment sampled in a brackish lake in Japan, capable of respiratory growth with various electron donors and acceptors. Based on gene sequence similarity, it is closely related to Desulfarculus baarsii 2st14(T). It belongs to the family Desulfarculaceae but does not affiliate with any existing genus.
ARCHIVES OF MICROBIOLOGY
(2023)
Article
Microbiology
Amaraja Joshi, Sonia Thite, Prachi Karodi, Neetha Joseph, Tushar Lodha
Summary: A new bacterium (MEB199(T)) isolated from Lonar Lake in India belongs to a newly proposed genus Alkalihalobacterium, with unique growth conditions and fatty acid composition; it shares high 16S rRNA gene sequence similarity with Ahb. alkalinitrilicus ANL-iso4(T).
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Microbiology
Takeshi Miyadera, Hisaya Kojima, Manabu Fukui
Summary: Strain Zm11(T) is a novel methylotrophic bacterium isolated from reddish brown snow in Japan, showing Gram-stain-negative, motile, and rod-shaped cells. It can grow at lower temperatures and slightly acidic conditions using only methanol as its carbon source.
ARCHIVES OF MICROBIOLOGY
(2021)
Article
Microbiology
Sara Szuroczki, Gorkhmaz Abbaszade, Karoly Boka, Peter Schumann, Meina Neumann-Schaal, Erika Toth
Summary: A new bacterial strain, named Szabonella alba gen. nov., sp. nov., was isolated from a water sample in Hungary. Phylogenetic analysis revealed that it is distinct from its closest relatives in the family Rhodobacteraceae based on 16S rRNA gene sequences and genome-related indices.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Bang-Bang Yang, Bo-Wen Ma, Jia Zhou, Wen-Wen Ma, Yu Luo, Jian-Hang Qu
Summary: A novel bacterium, designated NAS39(T), was isolated from interfacial sediment in Taihu Lake, PR China. It belongs to the genus Flavobacterium and forms a new cluster within this genus. Its closest relatives are Flavobacterium laiguense LB2P30(T) and Flavobacterium tiangeerense 0563(T). Based on its phenotype, chemotaxonomy, genotype, and phylogenetic characteristics, it is proposed as a new species named Flavobacterium taihuense sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Bo-Yuan Zhang, Ye Yuan, Jia Zhou, Xi- Feng Wang, Hai-Feng Li, Jian-Hang Qu
Summary: A taxonomic identification was performed on strain TH16- 21T, which was isolated from the inter-facial sediment of Taihu Lake, PR China. The strain was classified within the genus of Flavobacterium based on phylogenetic analysis. A novel species, Flavobacterium lacisediminis sp. nov., is proposed.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
Summary: A new Gram-negative bacterium was isolated from coral and identified as a potential new species in a new genus. The strain C21T shares 95.7% sequence identity to its closest neighbor based on 16S rRNA gene sequences. Phylogenetic analysis indicates that strain C21T forms a distinct branch in the family Cellvibrionaceae. Cellular fatty acids and polar lipids can also differentiate strain C21T from closely related type strains.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Sophie Mieszkin, Blandine Trouche, Julien Ancousture, Youssef Raouf, Stephane Uroz, Karine Alain
Summary: This study reported a novel bacterial strain BS-T2-15T, isolated from forest soil in close proximity to decaying oak wood. It was characterized using a polyphasic taxonomic approach and found to belong to a distinct and robust lineage in the order Burkholderiales. The strain exhibits some characteristic features such as being Gram-stain-negative, aerobic, motile, rod-shaped, and forming incrusted white to ivory colonies.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Jun-Hui Feng, Yu-Xiao Chang, Liang-Hui Li, Meng-Meng Li, Zong-Yu Huang, Ni Han, Wen-Jun Li, Rui-Fu Yang, Ping-Hua Qu, Yu-Jing Bi
Summary: A novel obligate anaerobic organism, Copranaerobaculum intestinale, was isolated from human faeces collected in Beijing, PR China. It represents a distinct lineage within the family Erysipelotrichaceae, with unique cell morphology and physiological characteristics.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Cheikh Ibrahima Lo, Sory Ibrahima Traore, Awa Diop, Melhem Bilen, Esam Ibraheem Azhar, Fehmida Bibi, Asif Jiman-Fatani, Muhammad Yasir, Jean-Christophe Lagier, Didier Raoult, Florence Fenollar, Pierre-Edouard Fournier
Summary: Using microbial culturomics, a new genus of bacteria named Arabiibacter massiliensis was isolated from a stool sample of a healthy 50-year-old Saudi Arabian woman.
CURRENT MICROBIOLOGY
(2022)
Article
Multidisciplinary Sciences
Afaf Hamame, Reham Magdy Wasfy, Cheikh Ibrahima Lo, Florence Fenollar, Didier Raoult, Pierre-Edouard Fournier, Linda Houhamdi
Summary: Two new bacterial strains, Marseille-P2698(T) and Marseille-P2260(T), were isolated from human stools using the culturomic method. These two strains were fully described using the taxonogenomic approach. Marseille-P2698(T) was identified as a Gram-negative, motile, non-spore-forming, rod-shaped bacterium, while Marseille-P2260(T) was identified as a Gram-positive, motile, spore-forming rod-shaped bacterium.
SCIENTIFIC REPORTS
(2023)
Article
Microbiology
Man Song, Zhen-Bo Mao, Yuan Liu, Guang-Li Wang, Feng Li, Long Zhang
Summary: A new bacterium strain, named Agriterribacter soli sp. nov., was isolated from herbicide-contaminated soil in Nanjing, PR China. This strain showed growth at a wide range of temperatures, pH values, and NaCl concentrations. Through morphological, physiological, chemotaxonomic, and phylogenetic analyses, it was clearly distinguished from its closest phylogenetic neighbors.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Multidisciplinary Sciences
Soyoung Yeo, Hyunjoon Park, Heebal Kim, Chang Beom Ryu, Chul Sung Huh
Summary: The human gut microbiota is a complex ecological system. In a culturomics study, a novel bacterium strain ICN-92133(T) was isolated from a patient with Crohn's disease, and its classification and phylogeny were determined. This research is significant for enhancing our understanding of the composition and function of gut microbiota.
SCIENTIFIC REPORTS
(2023)
Article
Microbiology
Jiseon Jeong, Veeraya Weerawongwiwat, Yunjeong Lee, Jong-Hwa Kim, Ampaitip Sukhoom, Kijeong Kim, Wonyong Kim
Summary: A novel bacterium strain CAU 1614(T) was isolated from a marine sediment sample collected in the Republic of Korea, belonging to a new genus Halomarinibacterium in the family Flavobacteriaceae. It is a Gram-negative, strictly aerobic, non-motile rod-shaped bacterium with optimal growth conditions at 30 degrees C, pH 7.0, and 2% NaCl. The genetic, phenotypic, and chemotaxonomic characteristics distinguish it as a new species Halomarinibacterium sedimenti gen. nov., sp. nov.
ARCHIVES OF MICROBIOLOGY
(2022)
Article
Engineering, Environmental
Zhongzhe Liu, Patrick McNamara, Daniel Zitomer
ENVIRONMENTAL SCIENCE & TECHNOLOGY
(2017)
Review
Green & Sustainable Science & Technology
Zhongzhe Liu, Simcha Singer, Yiran Tong, Lee Kimbell, Erik Anderson, Matthew Hughes, Daniel Zitomer, Patrick McNamara
RENEWABLE & SUSTAINABLE ENERGY REVIEWS
(2018)
Article
Engineering, Environmental
Anthony D. Kappell, Lee K. Kimbell, Matthew D. Seib, Daniel E. Carey, Melinda J. Choi, Tino Kalayil, Masanori Fujimoto, Daniel H. Zitomer, Patrick J. McNamara
ENVIRONMENTAL SCIENCE-WATER RESEARCH & TECHNOLOGY
(2018)
Letter
Engineering, Environmental
Patrick McNamara, Daniel Zitomer, Zhongzhe Liu
RESOURCES CONSERVATION AND RECYCLING
(2019)
Article
Chemistry, Physical
Zhongzhe Liu, Simcha Singer, Daniel Zitomer, Patrick McNamara
Article
Microbiology
Prince P. Mathai, Hannah M. Dunn, Kaushik Venkiteshwaran, Daniel H. Zitomer, James S. Maki, Satoshi Ishii, Michael J. Sadowsky
ENVIRONMENTAL MICROBIOLOGY
(2019)
Article
Engineering, Environmental
Patrick Mullen, Kaushik Venkiteshwaran, Daniel H. Zitomer, Brooke K. Mayer
WATER ENVIRONMENT RESEARCH
(2019)
Letter
Engineering, Environmental
Patrick McNamara, Daniel Zitomer, Zhongzhe Liu
WATER ENVIRONMENT RESEARCH
(2019)
Article
Biotechnology & Applied Microbiology
Prince P. Mathai, Melinda S. Nicholes, Kaushik Venkiteshwaran, Clairessa M. Brown, Rachel L. Morris, Daniel H. Zitomer, James S. Maki
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
(2020)
Article
Green & Sustainable Science & Technology
Saba Seyedi, Kaushik Venkiteshwaran, Nicholas Benn, Daniel Zitomer
Review
Biotechnology & Applied Microbiology
Saba Seyedi, Kaushik Venkiteshwaran, Daniel Zitomer
Summary: Pyrolysis and hydrothermal liquefaction are potential technologies for renewable energy production using wastewater sewage sludge and lignocellulosic biomass. However, the organic-rich liquids produced are currently challenging to manage, and may be harmful to the environment. Integrating anaerobic digestion with thermochemical processes can promote a circular economy by recovering resources and reducing environmental pollution.
REVIEWS IN ENVIRONMENTAL SCIENCE AND BIO-TECHNOLOGY
(2021)
Article
Biotechnology & Applied Microbiology
Masanori Fujimoto, Daniel E. Carey, Daniel H. Zitomer, Patrick J. McNamara
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
(2019)
Article
Energy & Fuels
Saba Seyedi, Kaushik Venkiteshwaran, Daniel Zitomer
FRONTIERS IN ENERGY RESEARCH
(2019)
Article
Engineering, Environmental
Anthony D. Kappell, Daniel E. Carey, Daniel H. Zitomer, Patrick J. McNamara
ENVIRONMENTAL SCIENCE-WATER RESEARCH & TECHNOLOGY
(2020)
Article
Environmental Sciences
Nicholas Benn, Daniel Zitomer
FRONTIERS IN ENVIRONMENTAL SCIENCE
(2018)