Article
Microbiology
Wenxuan He, Yangjie Li, Dechao Zhang
Summary: Strain KN72(T) is a novel bacterial species isolated from the Caroline Seamounts in the Pacific Ocean, belonging to the family Rhodospirillaceae. Through phylogenetic and genomic analysis, it is proposed as a new genus and species named Pacificispira spongiicola gen. nov., sp. nov.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
(2021)
Article
Microbiology
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
Summary: A Gram-stain-negative bacterium named Vineibacter terrae gen. nov., sp. nov. was isolated from vineyard soil in Taiwan. This bacterium is aerobic, non-motile, and capable of reducing nitrate, with optimal growth conditions at 30 degrees C and pH 7, belonging to the family Rhodospirillaceae.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Environmental Sciences
Ya-Ping Sun, Bei-Bei Wang, Zhang-Ping Wu, Xi-Wen Zheng, Jing Hou, Heng-Lin Cui
Summary: Five novel halophilic archaeal strains were isolated from coastal saline sediments and sea salt in China. They demonstrated typical morphology and growth characteristics and showed high similarities with existing species. However, based on genetic and phylogenetic analyses, it is confirmed that these strains represent five new species. This is the first report of a novel haloarchaeon isolated from a marine intertidal zone.
FRONTIERS IN MARINE SCIENCE
(2023)
Article
Microbiology
Hye Seon Song, Juseok Kim, Yeon Bee Kim, Se Hee Lee, Tae Woong Whon, Seong Woon Roh
Summary: Two novel halophilic archaeal strains were isolated from solar salt in South Korea. Through genetic, physiological, and biochemical analyses, they were found to represent a new genus and species in the family Halobacteriaceae.
JOURNAL OF MICROBIOLOGY
(2022)
Article
Microbiology
Kai Tang, Li-Hua Yang, Yu-Ping Chen, Yu Tao, Fu-Ying Feng, Jian-Yu Meng
Summary: The bacterial strain MIMtkB3(T) is a novel genus within the family Rhodospirillaceae, with unique growth conditions and chemical composition characteristics.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Toru Jojima, Yuki Ioku, Yasuhisa Fukuta, Norifumi Shirasaka, Yoshinobu Matsumura, Miho Mori
Summary: A novel moderately thermophilic aerobic bacterium, Collibacillus ludicampi, was isolated from soil in Japan. It belongs to the family Alicyclobacillaceae and shows highest similarity to Effusibacillus consociatus and Tumebacillus soil. The strain represents a novel species of a novel genus.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Sara Szuroczki, Gorkhmaz Abbaszade, Dominika Buni, Karoly Boka, Peter Schumann, Meina Neumann-Schaal, Balazs Vajna, Erika Toth
Summary: Three bacterial strains with facultative phototrophic capability were isolated from the water sample from Lake Ferto/Neusiedler See in Hungary. Phylogenetic analysis revealed that these strains form a distinct lineage within the family Rhodobacteraceae, possibly representing a new genus. The novel strains prefer alkaline environments and grow optimally at specific temperatures and salt concentrations.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Fatmah O. Sefrji, Gregoire Michoud, Ramona Marasco, Giuseppe Merlino, Daniele Daffonchio
Summary: The bacterium strain R1DC9(T) isolated from sediments of a mangrove stand on the Red Sea coast of Saudi Arabia is a distinct species within the phylum Bacteroidetes, representing a new genus in the order Cytophagales. It shows unique characteristics compared to known relatives and is proposed to belong to a new family Mangrovivirgaceae fam. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
D. Barrie Johnson, David S. Holmes, Eva Vergara, Roseanne Holanda, Eva Pakostova
Summary: Ten acidophilic bacteria strains, which form a monophyletic clade within Firmicutes, were isolated from different environments. Comparison of their complete genomes revealed two proposed genera (Sulfoacidibacillus and Ferroacidibacillus) and three proposed species (Sulfoacidibacillus ferrooxidans, Sulfoacidibacillus thermotolerans, and Ferroacidibacillus organovorans). These bacteria strains share physiological traits such as iron oxidation and reduction, as well as being obligately heterotrophic. Additionally, they exhibit different degrees of acid tolerance and temperature preferences. The importance of these findings is rated as 8 out of 10.
RESEARCH IN MICROBIOLOGY
(2023)
Article
Microbiology
Soohyun Maeng, Yuna Park, Ju Hyun Han, Sang Eun Lee, Myung Kyum Kim, Gayathri Subramani
Summary: The bacterium strain 17J28-1(T) isolated from soil in Jeju Island, Korea represents a novel genus and species in the family Chitinophagaceae, named Pseudocnuella soli gen. nov. sp. nov. It shows specific growth advantages and resistance under certain conditions.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
(2021)
Article
Microbiology
Wen-Hui Lian, Shuai Li, Zhi-Liang Lin, Jia-Rui Han, Osama Abdalla Abdelshafy Mohamad, Li Li, Ying Lin, Wael N. Hozzein, Lei Dong, Wen-Jun Li
Summary: A new strain SYSU D00434(T) was isolated from a dry sandy soil sample collected from the Gurbantunggut desert in Xinjiang, northwest PR China. It belongs to the family Hymenobacteraceae and represents a new species of a new genus, named Sabulibacter ruber gen. nov.. sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Biotechnology & Applied Microbiology
Hui Fan, Jiang Li, Weidong Wu, Rui Chen, Min Yang, Yinggang Zhang, Lulu Cong, Lirong Dai, Yu Deng, Lei Cheng, Shichun Ma
Summary: A Gram-stain positive bacterium JN-28T was isolated from Chinese strong-flavor liquor. It is moderately thermophilic, acidotolerant and aerotolerant anaerobic bacteria. It belongs to a novel genus and species Acidilutibacter cellobiosedens, and also proposed new families in the order Tissierellales.
SYSTEMATIC AND APPLIED MICROBIOLOGY
(2023)
Article
Multidisciplinary Sciences
Sang Weon Na, Byung Hee Chun, Seok-Hyeon Beak, Shehzad Abid Khan, Md. Najmul Haque, Jae Sung Lee, Che Ok Jeon, Sang-Suk Lee, Myunggi Baik
Summary: This study isolated a novel Gram-negative bacterium Pseudoprevotella muciniphila with mucin-degrading capabilities from the rumen epithelium of Korean cattle. The bacterium showed specific growth conditions and contained unique fatty acids, polar lipids, and respiratory quinones. Functional annotation of the genome revealed potential virulence factors that allow the bacterium to adhere to host cells and evade immune responses.
Article
Microbiology
Zhaobin Huang, Yu Guo, Qingqing Xiao, Xiupian Liu, Qiliang Lai
Summary: A novel bright-yellow pigmented bacterial strain SM2-F-T was isolated from mangrove sediment in Quanzhou, China. It belongs to a new genus Aegicerativicinus sediminis gen. nov., sp. nov., with optimal growth at 30 degrees C, pH 7.0, and 2.0% NaCl tolerance.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
(2021)
Article
Biodiversity Conservation
Maia Azpiazu-Muniozguren, Minerva Garcia, Lorena Laorden, Irati Martinez-Malaxetxebarria, Sergio Seoane, Joseba Bikandi, Javier Garaizar, Ilargi Martinez-Ballesteros
Summary: A new member of the Rhodobacteraceae family, named Anianabacter salinae, was isolated from Santa Engracia spring water during a prokaryotic diversity study in Anana Salt Valley. This bacterium exhibited extreme halotolerance and facultatively alkaliphilic characteristics. It formed a distinct branch within the Rhodobacteraceae family based on phylogenetic analysis.
Article
Microbiology
Ninfa Ramirez-Duran, Rafael R. de la Haba, Blanca Vera-Gargallo, Cristina Sanchez-Porro, Scarlett Alonso-Carmona, Horacio Sandoval-Trujillo, Antonio Ventosa
Summary: In this study, a comparative genomic analysis of the actinobacterial genus Saccharomonospora was conducted, revealing a high degree of novelty and diversity of biosynthetic gene clusters (BGCs) in members of this genus. The study supports a recent speciation event between Saccharomonospora halophila and Saccharomonospora iraqiensis.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Biotechnology & Applied Microbiology
Negar Mozaheb, Ehsan Arefian, Amir Aliyan, Mohammad Ali Amoozegar
Summary: The study evaluated the antioxidant effectiveness of carotenoid extract from extremely halophilic archaeon Halovenus aranensis strain EB27(T). The extracted carotenoids showed strong antioxidant activity, suggesting high potential for clinical and industrial applications.
INTERNATIONAL MICROBIOLOGY
(2022)
Article
Microbiology
Eduarda Almeida, Valentina Henriques, Sandra Wiegand, Luciana Albuquerque, Peter Schumann, Timo Kohn, Christian Jogler, Milton Simoes da Costa, Alexandre Lobo-da-Cunha, Maria de Fatima Carvalho, Olga Maria Lage
Summary: A novel micro-organism named Salsipaludibacter albus was isolated from dry salt in Portugal. It is a Gram-stain-positive, rod-shaped bacterium that requires oxygen for growth. The strain exhibits pleomorphism, with long filaments of rod-shaped cells and coccoid cellular forms at the end of the filaments. It grows best at temperatures between 20-30 degrees C, NaCl concentrations of 2%, and pH values of 8.0-11.0. Based on genomic, phylogenetic, phenotypic, and chemotaxonomic studies, it is proposed that Salsipaludibacter albus represents a new genus, species, family, and order.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Sara Szuroczki, Gorkhmaz Abbaszade, Karoly Boka, Peter Schumann, Meina Neumann-Schaal, Erika Toth
Summary: A new bacterial strain, named Szabonella alba gen. nov., sp. nov., was isolated from a water sample in Hungary. Phylogenetic analysis revealed that it is distinct from its closest relatives in the family Rhodobacteraceae based on 16S rRNA gene sequences and genome-related indices.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Ghazale Laliany, Saeid Amel Jamehdar, Ali Makhdoumi
Summary: This study demonstrates that the presence of Acinetobacter baumannii or Enterococcus faecium enhances the virulence of Pseudomonas aeruginosa by promoting biofilm formation, motility, and synergistic hemolysis activity.
ARCHIVES OF MICROBIOLOGY
(2022)
Article
Multidisciplinary Sciences
Roohollah Kheiri, Maliheh Mehrshad, Ahmad Ali Pourbabaee, Antonio Ventosa, Mohammad Ali Amoozegar
Summary: Lake Urmia in Iran is a hypersaline environment with a salinity of about 27%. Metagenomic analysis revealed that the microbial community in the lake is dominated by Haloferacaceae family (69.8%), mainly Haloquadratum (59.3%) and Halonotius (9.1%). The bacterial community is mainly composed of Salinibacter ruber (23.3%). Genomic variation analysis showed a high level of SNVs and insertions in Lake Urmia's community, possibly due to transformation caused by the extreme conditions and high ionic concentrations.
SCIENTIFIC REPORTS
(2023)
Article
Microbiology
Maria del Carmen Montero-Calasanz, Adnan Yaramis, Manfred Rohde, Peter Schumann, Hans-Peter Klenk, Jan P. Meier-Kolthoff
Summary: Integrating genomic information into microbial systematics allows for reliable prokaryotic classification. In silico chemotaxonomic analysis is being introduced to replace traditional laboratory methods for characterizing taxa, increasing speed and accuracy of taxonomic reports. Genomics has already played a role in taxonomic rearrangement, highlighting the need for revisiting taxonomy in light of new genomic data.
FRONTIERS IN MICROBIOLOGY
(2022)
Article
Plant Sciences
Somayeh Rasoli-dogaheh, Mostafa Noroozi, Javad Khansha, Mohammad Ali Amoozegar, Rezvan Rahimi, Mahdi Moshtaghi Nikou, Tomas Hauer
Summary: A study on the diversity of cyanobacteria in the rainwater basin of the Persian Gulf region found a novel taxon, Khargia iranica, on Kharg Island. Similar strains were also found in South Italy and India, leading to the recognition of the new genus Khargia. Different analytical methods were used to identify and classify the new species.
Correction
Multidisciplinary Sciences
Roohollah Kheiri, Maliheh Mehrshad, Ahmad Ali Pourbabaee, Antonio Ventosa, Mohammad Ali Amoozegar
SCIENTIFIC REPORTS
(2023)
Article
Microbiology
Maryam Yavari-Bafghi, Maryam Rezaei Somee, Mohammad Ali Amoozegar, Seyed Mohammad Mehdi Dastgheib, Mahmoud Shavandi
Summary: This study investigated the removal of phenol using Small Bioreactor Chambers and CaO2 nanoparticles in continuous-flow sand-packed columns. The results showed that simultaneous biostimulation and bioaugmentation could completely eliminate phenol within 42 days, while natural bioremediation columns still had 80.2% remaining at the end of the experiment. CaO2 injection decreased microbial diversity, with order-level groups such as Rhodobacterales and Xanthomonadales dominating in biostimulation columns. Long-term exposure to phenol shifted the microbial population towards heterotrophic members with the potential for phenol and hydrocarbon degradation.
FRONTIERS IN MICROBIOLOGY
(2023)
Review
Microbiology
Elham Lashani, Mohammad Ali Amoozegar, Raymond J. Turner, Hamid Moghimi
Summary: Microorganisms play a crucial role in reducing metalloid contamination risks through their ability to tolerate and detoxify these elements.
Article
Microbiology
Alicia Garcia-Roldan, Rafael R. de la Haba, Blanca Vera-Gargallo, Cristina Sanchez-Porro, Antonio Ventosa
Summary: Metagenomic sequences of prokaryotic microbiota from brine of a crystallizer pond in a saltern in Isla Cristina, southwest Spain, were obtained using Illumina. Haloarchaea and Salinibacter were the most abundant prokaryotes.
MICROBIOLOGY RESOURCE ANNOUNCEMENTS
(2023)
Article
Environmental Sciences
Elham Lashani, Hamid Moghimi, Raymond J. Turner, Mohammad Ali Amoozegar
Summary: Selenium oxyanions are released into environments from various activities and are present in wastewater in many locations worldwide. Excessive amounts of selenium have negative impacts on living organisms. Halophilic and halotolerant microorganisms were used for selenium oxyanion remediation in wastewater containing salt. Factors such as aeration, carbon sources, competitive electron acceptors, and reductase inhibitors were investigated for their effects on SeO32- removal. The study also explored the remediation of SeO32- in agricultural effluents containing NO3-. The results showed that aerobic conditions with succinate as a carbon source were most effective for SeO32- removal. Certain ions, such as WO42- and TeO32-, decreased the removal percentage, while SO42- and PO43- had minimal interference. NO3- had an adverse effect on SeO32- biotransformation. Consortia of halophilic/halotolerant bacteria and yeasts were able to reduce SeO32- in synthetic agricultural wastewater by 45-53% within 120 hours. This study suggests that these consortia could be used for the bioremediation of selenium-contaminated drainage water.
ENVIRONMENTAL POLLUTION
(2023)
Article
Multidisciplinary Sciences
Atefeh Safarpour, Marzieh Ebrahimi, Seyed Abolhassan Shahzadeh Fazeli, Mohammad Ali Amoozegar
Summary: In recent years, there has been growing interest in the anticancer properties of metabolites from halophilic microorganisms. This study investigated the effects of supernatant metabolites from 29 halophilic bacterial strains on the stem cell-like properties of six human cancer cell lines. The metabolites from Salinivenus iranica demonstrated the most potent cytotoxic effect on breast cancer cell lines, with no effect on normal cells. The purified cytotoxic molecule, a phenol amine, downregulated the expression of the pluripotency gene SOX-2 in breast cancer cells.
SCIENTIFIC REPORTS
(2023)
Article
Biotechnology & Applied Microbiology
Yeganeh Farrokhi, Zeinab Neshati, Parastoo Saniee, Ali Makhdoumi
Summary: This study found that two recently isolated probiotic strains, Bacillus sp. 1630F and Enterococcus sp. 7C37, have the ability to form biofilm and combat H. pylori biofilm formation. Compared to reference probiotics, Lactobacillus casei and Bifidobacterium bifidum, Bacillus and Enterococcus strains showed higher biofilm rates. They were also more effective in inhibiting H. pylori biofilm formation on polystyrene and AGS cells. Bacillus and Enterococcus strains achieved inhibition by promoting the expression of luxS and decreasing the expression of ropD.
INTERNATIONAL MICROBIOLOGY
(2023)