Guiding the Search for Native-like Protein Conformations with an Ab-initio Tree-based Exploration

Mimicking the folding pathway to improve homology-free protein structure prediction

(2009) J. DeBartolo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiscale characterization of protein conformational ensembles

(2009) Amarda Shehu et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Critical assessment of methods of protein structure prediction-Round VIII

(2009) John Moult et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Planning Among Movable Obstacles with Artificial Constraints

(2008) Mike Stilman et al.   INTERNATIONAL JOURNAL OF ROBOTICS RESEARCH

Unfolding the fold of cyclic cysteine-rich peptides

(2008) Amarda Shehu et al.   PROTEIN SCIENCE

Guiding conformation space search with an all-atom energy potential

(2008) TJ Brunette et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Ab Initio Folding of Proteins with All-Atom Discrete Molecular Dynamics

(2008) Feng Ding et al.   STRUCTURE

Coarse-grained models of protein folding: toy models or predictive tools?

(2007) Cecilia Clementi   CURRENT OPINION IN STRUCTURAL BIOLOGY