Inferring the demographic history ofDrosophila subobscurafrom nucleotide variation at regions not affected by chromosomal inversions

A molecular perspective on a complex polymorphic inversion system with cytological evidence of multiply reused breakpoints

(2015) D J Orengo et al.   HEREDITY

Characterization of the Breakpoints of a Polymorphic Inversion Complex Detects Strict and Broad Breakpoint Reuse at the Molecular Level

(2014) Eva Puerma et al.   MOLECULAR BIOLOGY AND EVOLUTION

Vanishing Chromosomal Inversion Clines in Drosophila subobscura from Chile: Is Behavioral Thermoregulation to Blame?

(2013) Luis E. Castañeda et al.   AMERICAN NATURALIST

INTROGRESSION IN THEDROSOPHILA SUBOBSCURA-D. MADEIRENSISSISTER SPECIES: EVIDENCE OF GENE FLOW IN NUCLEAR GENES DESPITE MITOCHONDRIAL DIFFERENTIATION

(2013) Danielle K. Herrig et al.   EVOLUTION

Gene flow and gene flux shape evolutionary patterns of variation in Drosophila subobscura

(2013) C Pegueroles et al.   HEREDITY

Relevant statistics for Bayesian model choice

(2013) Jean-Michel Marin et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

PHYLOGENETIC CONSTRAINTS IN KEY FUNCTIONAL TRAITS BEHIND SPECIES’ CLIMATE NICHES: PATTERNS OF DESICCATION AND COLD RESISTANCE ACROSS 95DROSOPHILASPECIES

(2012) Vanessa Kellermann et al.   EVOLUTION

STRUCTURE AND POPULATION GENETICS OF THE BREAKPOINTS OF A POLYMORPHIC INVERSION INDROSOPHILA SUBOBSCURA

(2012) Montserrat Papaceit et al.   EVOLUTION

Selective Sweeps in Multilocus Models of Quantitative Traits

(2012) P. Pavlidis et al.   GENETICS

Demographic Inference Reveals African and European Admixture in the North American Drosophila melanogaster Population

(2012) P. Duchen et al.   GENETICS

Estimating Divergence Dates and Substitution Rates in the Drosophila Phylogeny

(2012) Darren J. Obbard et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Genetic Content of Chromosomal Inversions across a Wide Latitudinal Gradient

(2012) Pedro Simões et al.   PLoS One

Effects of Inversions on Within- and Between-Species Recombination and Divergence

(2011) Laurie S. Stevison et al.   Genome Biology and Evolution

Approximate Bayesian Analysis of Drosophila melanogaster Polymorphism Data Reveals a Recent Colonization of Southeast Asia

(2011) Stefan J.Y. Laurent et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Lack of confidence in approximate Bayesian computation model choice

(2011) C. P. Robert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ABCtoolbox: a versatile toolkit for approximate Bayesian computations

(2010) Daniel Wegmann et al.   BMC BIOINFORMATICS

Nucleotide diversity of a ND5 fragment confirms that population expansion is the most suitable explanation for the mtDNA haplotype polymorphism of Drosophila subobscura

(2010) José A. Castro et al.   GENETICA

A recombination survey using microsatellites: the O chromosome of Drosophila subobscura

(2010) Cinta Pegueroles et al.   GENETICA

Molecular population genetics of the OBP83 genomic region in Drosophila subobscura and D. guanche: contrasting the effects of natural selection and gene arrangement expansion in the patterns of nucleotide variation

(2010) A Sánchez-Gracia et al.   HEREDITY

Distinguishing between population bottleneck and population subdivision by a Bayesian model choice procedure

(2010) BENJAMIN M. PETER et al.   MOLECULAR ECOLOGY

Approximate Bayesian Computation (ABC) in practice

(2010) Katalin Csilléry et al.   TRENDS IN ECOLOGY & EVOLUTION

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Partial thermoregulatory compensation by a rapidly evolving invasive species along a latitudinal cline

(2009) Raymond B. Huey et al.   ECOLOGY

Bayesian Computation and Model Selection Without Likelihoods

(2009) C. Leuenberger et al.   GENETICS

Efficient Approximate Bayesian Computation Coupled With Markov Chain Monte Carlo Without Likelihood

(2009) Daniel Wegmann et al.   GENETICS

ABC: A useful Bayesian tool for the analysis of population data

(2009) J.S. Lopes et al.   INFECTION GENETICS AND EVOLUTION

Uncovering the Footprint of Positive Selection on the X Chromosome of Drosophila melanogaster

(2009) D. J. Orengo et al.   MOLECULAR BIOLOGY AND EVOLUTION

Wet phases in the Sahara/Sahel region and human migration patterns in North Africa

(2009) I. S. Castaneda et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Genomics of Speciation in Drosophila: Diversity, Divergence, and Introgression Estimated Using Low-Coverage Genome Sequencing

(2009) Rob J. Kulathinal et al.   PLoS Genetics

Genetic Exchange versus Genetic Differentiation in a Medium-Sized Inversion of Drosophila: The A2/Ast Arrangements of Drosophila subobscura

(2008) C. Nobrega et al.   MOLECULAR BIOLOGY AND EVOLUTION

Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence

(2008) R. J. Kulathinal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Approximately Sufficient Statistics and Bayesian Computation

(2008) Paul Joyce et al.   Statistical Applications in Genetics and Molecular Biology