Whole-genome sequencing reveals absence of recent gene flow and separate demographic histories forAnopheles punctulatusmosquitoes in Papua New Guinea

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Progress in mosquito net coverage in Papua New Guinea

(2014) Manuel W Hetzel et al.   MALARIA JOURNAL

Multilocus nuclear DNA markers reveal population structure and demography ofAnopheles minimus

(2014) Jyotsana Dixit et al.   MOLECULAR ECOLOGY

Contemporary gene flow between wild An. gambiae s.s. and An. arabiensis

(2014) David Weetman et al.   Parasites & Vectors

Extensive introgression in a malaria vector species complex revealed by phylogenomics

(2014) M. C. Fontaine et al.   SCIENCE

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes

(2014) D. E. Neafsey et al.   SCIENCE

Adaptive introgression between Anopheles sibling species eliminates a major genomic island but not reproductive isolation

(2014) Chris S. Clarkson et al.   Nature Communications

Estimation of the Spontaneous Mutation Rate per Nucleotide Site in a Drosophila melanogaster Full-Sib Family

(2013) Peter D. Keightley et al.   GENETICS

Multilocus population genetic analysis of the Southwest Pacific malaria vector Anopheles punctulatus

(2013) Ignatius M. Seah et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Barrier screens: a method to sample blood-fed and host-seeking exophilic mosquitoes

(2013) Thomas R Burkot et al.   MALARIA JOURNAL

Mitochondrial genome sequences reveal deep divergences among Anopheles punctulatus sibling species in Papua New Guinea

(2013) Kyle Logue et al.   MALARIA JOURNAL

Understanding the origin of species with genome-scale data: modelling gene flow

(2013) Vitor Sousa et al.   NATURE REVIEWS GENETICS

Spatiotemporal dynamics of gene flow and hybrid fitness between the M and S forms of the malaria mosquito, Anopheles gambiae

(2013) Y. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High genome heterozygosity and endemic genetic recombination in the wheat stripe rust fungus

(2013) Wenming Zheng et al.   Nature Communications

Multiplex Assay for Species Identification and Monitoring of Insecticide Resistance in Anopheles punctulatus Group Populations of Papua New Guinea

(2012) Cara N. Henry-Halldin et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Draft Genome of the Pearl Oyster Pinctada fucata: A Platform for Understanding Bivalve Biology

(2012) T. Takeuchi et al.   DNA RESEARCH

Population structure, mitochondrial polyphyly and the repeated loss of human biting ability in anopheline mosquitoes from the southwest Pacific

(2012) L. AMBROSE et al.   MOLECULAR ECOLOGY

The oyster genome reveals stress adaptation and complexity of shell formation

(2012) Guofan Zhang et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Quake: quality-aware detection and correction of sequencing errors

(2012) David R Kelley et al.   GENOME BIOLOGY

Research challenges and gaps in malaria knowledge in Papua New Guinea

(2011) James W. Kazura et al.   ACTA TROPICA

High Throughput Multiplex Assay for Species Identification of Papua New Guinea Malaria Vectors: Members of the Anopheles punctulatus (Diptera: Culicidae) Species Group

(2011) Cara N. Henry-Halldin et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Inference of human population history from individual whole-genome sequences

(2011) Heng Li et al.   NATURE

A Cryptic Subgroup of Anopheles gambiae Is Highly Susceptible to Human Malaria Parasites

(2011) M. M. Riehle et al.   SCIENCE

Challenges in Estimating Insecticide Selection Pressures from Mosquito Field Data

(2011) Susana Barbosa et al.   PLoS Neglected Tropical Diseases

mlRho - a program for estimating the population mutation and recombination rates from shotgun-sequenced diploid genomes

(2010) BERNHARD HAUBOLD et al.   MOLECULAR ECOLOGY

Widespread Divergence Between Incipient Anopheles gambiae Species Revealed by Whole Genome Sequences

(2010) M. K. N. Lawniczak et al.   SCIENCE

SNP Genotyping Defines Complex Gene-Flow Boundaries Among African Malaria Vector Mosquitoes

(2010) D. E. Neafsey et al.   SCIENCE

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY