Lineage-specific sequence evolution and exon edge conservation partially explain the relationship between evolutionary rate and expression level inA. thaliana

Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing

(2014) Péter Szövényi et al.   Genome Biology and Evolution

Mating systems and selection efficacy: a test using chloroplastic sequence data in Angiosperms

(2014) S. Glémin et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Correcting for Differential Transcript Coverage Reveals a Strong Relationship between Alternative Splicing and Organism Complexity

(2014) Lu Chen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Association Mapping of Germination Traits in Arabidopsis thaliana Under Light and Nutrient Treatments: Searching for G×E Effects

(2014) Ginnie D. Morrison et al.   G3-Genes Genomes Genetics

Evolutionary consequences of self-fertilization in plants

(2013) S. I. Wright et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The evolution, impact and properties of exonic splice enhancers

(2013) Eva Cáceres et al.   GENOME BIOLOGY

Genomic Determinants of Protein Evolution and Polymorphism in Arabidopsis

(2011) Tanja Slotte et al.   Genome Biology and Evolution

Factors that Contribute to Variation in Evolutionary Rate among Arabidopsis Genes

(2011) L. Yang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

(2011) Xiangchao Gan et al.   NATURE

The genome of the extremophile crucifer Thellungiella parvula

(2011) Maheshi Dassanayake et al.   NATURE GENETICS

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

(2011) Tina T Hu et al.   NATURE GENETICS

Whole-genome sequencing of multiple Arabidopsis thaliana populations

(2011) Jun Cao et al.   NATURE GENETICS

Evolution of Exon-Intron Structure and Alternative Splicing

(2011) Tomasz E. Koralewski et al.   PLoS One

The Effects of Network Neighbours on Protein Evolution

(2011) Guang-Zhong Wang et al.   PLoS One

Expression breadth and expression abundance behave differently in correlations with evolutionary rates

(2010) Seung Park et al.   BMC EVOLUTIONARY BIOLOGY

DNA repair and recombination in higher plants: insights from comparative genomics of arabidopsis and rice

(2010) Sanjay K Singh et al.   BMC GENOMICS

Expression Level, Evolutionary Rate, and the Cost of Expression

(2010) J. L. Cherry   Genome Biology and Evolution

Lineage-Specific Variation in Intensity of Natural Selection in Mammals

(2010) M. Toll-Riera et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome Wide Analyses Reveal Little Evidence for Adaptive Evolution in Many Plant Species

(2010) T. I. Gossmann et al.   MOLECULAR BIOLOGY AND EVOLUTION

Expansion of the eukaryotic proteome by alternative splicing

(2010) Timothy W. Nilsen et al.   NATURE

The BioGRID Interaction Database: 2011 update

(2010) C. Stark et al.   NUCLEIC ACIDS RESEARCH

Anopheles Immune Genes and Amino Acid Sites Evolving Under the Effect of Positive Selection

(2010) Aristeidis Parmakelis et al.   PLoS One

Translation efficiency is determined by both codon bias and folding energy

(2010) Tamir Tuller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In plants, expression breadth and expression level distinctly and non-linearly correlate with gene structure

(2009) Hangxing Yang   Biology Direct

Why do species vary in their rate of molecular evolution?

(2009) L. Bromham   Biology Letters

Patterns of exon-intron architecture variation of genes in eukaryotic genomes

(2009) Liucun Zhu et al.   BMC GENOMICS

Multifunctionality dominantly determines the rate of human housekeeping and tissue specific interacting protein evolution

(2009) Soumita Podder et al.   GENE

Historical Divergence and Gene Flow in the Genus Zea

(2009) J. Ross-Ibarra et al.   GENETICS

Highly Expressed and Slowly Evolving Proteins Share Compositional Properties with Thermophilic Proteins

(2009) J. L. Cherry   MOLECULAR BIOLOGY AND EVOLUTION

Integrated Assessment of Genomic Correlates of Protein Evolutionary Rate

(2009) Yu Xia et al.   PLoS Computational Biology

Positive selection drives a correlation between non-synonymous/synonymous divergence and functional divergence

(2008) Jacob A. Tennessen   BIOINFORMATICS

Selection on Amino Acid Substitutions in Arabidopsis

(2008) J. P. Foxe et al.   MOLECULAR BIOLOGY AND EVOLUTION

Standard and generalized McDonald-Kreitman test: a website to detect selection by comparing different classes of DNA sites

(2008) R. Egea et al.   NUCLEIC ACIDS RESEARCH

Gene-Specific Signatures of Elevated Non-Synonymous Substitution Rates Correlate Poorly across the Plasmodium Genus

(2008) Gareth D. Weedall et al.   PLoS One

Discovery and revision of Arabidopsis genes by proteogenomics

(2008) N. E. Castellana et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Scale Proteomics Reveals Arabidopsis thaliana Gene Models and Proteome Dynamics

(2008) K. Baerenfaller et al.   SCIENCE

Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis

(2008) A. Loytynoja et al.   SCIENCE

Evolution of protein-coding genes in Drosophila

(2008) Amanda M. Larracuente et al.   TRENDS IN GENETICS