Accelerated Evolution of Enhancer Hotspots in the Mammal Ancestor

Mutations in KAT6B, Encoding a Histone Acetyltransferase, Cause Genitopatellar Syndrome

(2012) Philippe M. Campeau et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Coding exons function as tissue-specific enhancers of nearby genes

(2012) Ramon Y. Birnbaum et al.   GENOME RESEARCH

A map of the cis-regulatory sequences in the mouse genome

(2012) Yin Shen et al.   NATURE

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

ChromHMM: automating chromatin-state discovery and characterization

(2012) Jason Ernst et al.   NATURE METHODS

Functional characterization of the rod visual pigment of the echidna (Tachyglossus aculeatus), a basal mammal

(2012) CONSTANZE BICKELMANN et al.   VISUAL NEUROSCIENCE

Gata2 Is Required for Migration and Differentiation of Retinorecipient Neurons in the Superior Colliculus

(2011) R. T. Willett et al.   JOURNAL OF NEUROSCIENCE

A high-resolution map of human evolutionary constraint using 29 mammals

(2011) Kerstin Lindblad-Toh et al.   NATURE

Morphological evolution caused by many subtle-effect substitutions in regulatory DNA

(2011) Nicolás Frankel et al.   NATURE

A Jurassic eutherian mammal and divergence of marsupials and placentals

(2011) Zhe-Xi Luo et al.   NATURE

The Nocturnal Bottleneck and the Evolution of Mammalian Vision

(2010) Christopher P. Heesy et al.   BRAIN BEHAVIOR AND EVOLUTION

PHAST and RPHAST: phylogenetic analysis with space/time models

(2010) M. J. Hubisz et al.   BRIEFINGS IN BIOINFORMATICS

A unique chromatin signature uncovers early developmental enhancers in humans

(2010) Alvaro Rada-Iglesias et al.   NATURE

ChIP-Seq identification of weakly conserved heart enhancers

(2010) Matthew J Blow et al.   NATURE GENETICS

A neuronal migratory pathway crossing from diencephalon to telencephalon populates amygdala nuclei

(2010) Fernando García-Moreno et al.   NATURE NEUROSCIENCE

The UCSC Genome Browser database: update 2011

(2010) P. A. Fujita et al.   NUCLEIC ACIDS RESEARCH

Differential Expression of LIM-Homeodomain Factors in Cajal-Retzius Cells of Primates, Rodents, and Birds

(2009) A. Abellan et al.   CEREBRAL CORTEX

Regulatory DNAs and the evolution of human development

(2009) James P Noonan   CURRENT OPINION IN GENETICS & DEVELOPMENT

GATA2-dependent and region-specific regulation ofGata2transcription in the mouse midbrain

(2009) Daisuke Nozawa et al.   GENES TO CELLS

Detection of nonneutral substitution rates on mammalian phylogenies

(2009) K. S. Pollard et al.   GENOME RESEARCH

Reptilian heart development and the molecular basis of cardiac chamber evolution

(2009) Kazuko Koshiba-Takeuchi et al.   NATURE

ChIP-seq accurately predicts tissue-specific activity of enhancers

(2009) Axel Visel et al.   NATURE

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

(2009) Y. F. Chan et al.   SCIENCE

Defining the Functional Boundaries of theGata2Locus by Rescue with a Linked Bacterial Artificial Chromosome Transgene

(2008) William Brandt et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Ribosome Collisions and Translation Efficiency: Optimization by Codon Usage and mRNA Destabilization

(2008) Namiko Mitarai et al.   JOURNAL OF MOLECULAR BIOLOGY

Genome analysis of the platypus reveals unique signatures of evolution

(2008) Wesley C. Warren et al.   NATURE

Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing

(2008) Elizabeth D. Wederell et al.   NUCLEIC ACIDS RESEARCH

Possible involvement of SINEs in mammalian-specific brain formation

(2008) T. Sasaki et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cone visual pigments of monotremes: Filling the phylogenetic gap

(2008) MATTHEW J. WAKEFIELD et al.   VISUAL NEUROSCIENCE

Conserved pattern of OTP-positive cells in the paraventricular nucleus and other hypothalamic sites of tetrapods

(2007) Sylvia M. Bardet et al.   BRAIN RESEARCH BULLETIN