Parallel Functional Changes in Independent Testis-Specific Duplicates of Aldehyde dehydrogenase in Drosophila

The Branch-Site Test of Positive Selection Is Surprisingly Robust but Lacks Power under Synonymous Substitution Saturation and Variation in GC

(2013) Walid H. Gharib et al.   MOLECULAR BIOLOGY AND EVOLUTION

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

FlyBase: improvements to the bibliography

(2012) Steven J. Marygold et al.   NUCLEIC ACIDS RESEARCH

Gene duplication, tissue-specific gene expression and sexual conflict in stalk-eyed flies (Diopsidae)

(2012) R. H. Baker et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Phylogenetic Patterns of Geographical and Ecological Diversification in the Subgenus Drosophila

(2012) Ramiro Morales-Hojas et al.   PLoS One

Parallel Molecular Evolution in an Herbivore Community

(2012) Y. Zhen et al.   SCIENCE

Recombination Modulates How Selection Affects Linked Sites in Drosophila

(2012) Suzanne E. McGaugh et al.   PLOS BIOLOGY

Drosophila lacking a homologue of mammalian ALDH2 have multiple fitness defects

(2011) Mahul Chakraborty et al.   CHEMICO-BIOLOGICAL INTERACTIONS

Fancd2 counteracts the toxic effects of naturally produced aldehydes in mice

(2011) Frédéric Langevin et al.   NATURE

Intralocus sexual conflict resolved through gene duplication

(2011) Miguel Gallach et al.   TRENDS IN ECOLOGY & EVOLUTION

Analyses of Nuclearly Encoded Mitochondrial Genes Suggest Gene Duplication as a Mechanism for Resolving Intralocus Sexually Antagonistic Conflict in Drosophila

(2010) Miguel Gallach et al.   Genome Biology and Evolution

Conformer Generation with OMEGA: Algorithm and Validation Using High Quality Structures from the Protein Databank and Cambridge Structural Database

(2010) Paul C. D. Hawkins et al.   Journal of Chemical Information and Modeling

Resolving Intralocus Sexual Conflict: Genetic Mechanisms and Time Frame

(2010) A. D. Stewart et al.   JOURNAL OF HEREDITY

The evolution of gene duplications: classifying and distinguishing between models

(2010) Hideki Innan et al.   NATURE REVIEWS GENETICS

Structural shifts of aldehyde dehydrogenase enzymes were instrumental for the early evolution of retinoid-dependent axial patterning in metazoans

(2010) T. J. P. Sobreira et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Causes and evolutionary significance of genetic convergence

(2010) Pascal-Antoine Christin et al.   TRENDS IN GENETICS

Unlocking the secrets of the genome

(2009) Susan E. Celniker et al.   NATURE

Reliabilities of identifying positive selection by the branch-site and the site-prediction methods

(2009) M. Nozawa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intralocus sexual conflict

(2009) Russell Bonduriansky et al.   TRENDS IN ECOLOGY & EVOLUTION

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH

Alternating evolutionary pressure in a genetic algorithm facilitates protein model selection

(2008) Marc N Offman et al.   BMC STRUCTURAL BIOLOGY

Functional characterization of a Drosophila melanogaster succinic semialdehyde dehydrogenase and a non-specific aldehyde dehydrogenase

(2007) B ROTHACKER et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY