Abscisic Acid (ABA) Regulation of Arabidopsis SR Protein Gene Expression

Genome-wide analysis of alternative splicing of pre-mRNA under salt stress in Arabidopsis

(2014) Feng Ding et al.   BMC GENOMICS

A Mesoscale Abscisic Acid Hormone Interactome Reveals a Dynamic Signaling Landscape in Arabidopsis

(2014) Shelley Lumba et al.   DEVELOPMENTAL CELL

A homolog of splicing factor SF1 is essential for development and is involved in the alternative splicing of pre-mRNA inArabidopsis thaliana

(2014) Yun Hee Jang et al.   PLANT JOURNAL

Intron Retention in the 5′UTR of the Novel ZIF2 Transporter Enhances Translation to Promote Zinc Tolerance in Arabidopsis

(2014) Estelle Remy et al.   PLoS Genetics

Alternative splicing: a pivotal step between eukaryotic transcription and translation

(2013) Alberto R. Kornblihtt et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Alternative Splicing at the Intersection of Biological Timing, Development, and Stress Responses

(2013) D. Staiger et al.   PLANT CELL

Complexity of the Alternative Splicing Landscape in Plants

(2013) A. S. N. Reddy et al.   PLANT CELL

The root of ABA action in environmental stress response

(2013) Jing Han Hong et al.   PLANT CELL REPORTS

ABI4 Regulates Primary Seed Dormancy by Regulating the Biogenesis of Abscisic Acid and Gibberellins in Arabidopsis

(2013) Kai Shu et al.   PLoS Genetics

A KH-Domain RNA-Binding Protein Interacts with FIERY2/CTD Phosphatase-Like 1 and Splicing Factors and Is Important for Pre-mRNA Splicing in Arabidopsis

(2013) Tao Chen et al.   PLoS Genetics

Mining Arabidopsis thaliana RNA-seq data with Integrated Genome Browser reveals stress-induced alternative splicing of the putative splicing regulator SR45a

(2012) Alyssa A. Gulledge et al.   AMERICAN JOURNAL OF BOTANY

Transcriptome survey reveals increased complexity of the alternative splicing landscape inArabidopsis

(2012) Yamile Marquez et al.   GENOME RESEARCH

Regulating the regulators: Serine/arginine-rich proteins under scrutiny

(2012) Guillermo Risso et al.   IUBMB LIFE

Cooperation of three WRKY-domain transcription factors WRKY18, WRKY40, and WRKY60 in repressing two ABA-responsive genes ABI4 and ABI5 in Arabidopsis

(2012) Zhi-Qiang Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide identification and analysis of late embryogenesis abundant (LEA) genes in Prunus mume

(2012) Dongliang Du et al.   MOLECULAR BIOLOGY REPORTS

Identification of an intronic splicing regulatory element involved in auto-regulation of alternative splicing ofSCL33pre-mRNA

(2012) Julie Thomas et al.   PLANT JOURNAL

On the physiological significance of alternative splicing events in higher plants

(2012) Raquel F. Carvalho et al.   PROTOPLASMA

ABI4: versatile activator and repressor

(2012) Julia J. Wind et al.   TRENDS IN PLANT SCIENCE

FIMO: scanning for occurrences of a given motif

(2011) Charles E. Grant et al.   BIOINFORMATICS

ABA-mediated transcriptional regulation in response to osmotic stress in plants

(2011) Yasunari Fujita et al.   JOURNAL OF PLANT RESEARCH

Identification of Alternative Splicing Events Regulated by an Arabidopsis Serine/Arginine-Like Protein, atSR45a, in Response to High-Light Stress using a Tiling Array

(2011) Kazuya Yoshimura et al.   PLANT AND CELL PHYSIOLOGY

The Transcription Factor ABI4 Is Required for the Ascorbic Acid–Dependent Regulation of Growth and Regulation of Jasmonate-Dependent Defense Signaling Pathways inArabidopsis

(2011) Pavel I. Kerchev et al.   PLANT CELL

Comparative Analysis of Serine/Arginine-Rich Proteins across 27 Eukaryotes: Insights into Sub-Family Classification and Extent of Alternative Splicing

(2011) Dale N. Richardson et al.   PLoS One

Abscisic Acid: Emergence of a Core Signaling Network

(2010) Sean R. Cutler et al.   Annual Review of Plant Biology

A rational nomenclature for serine/arginine-rich protein splicing factors (SR proteins)

(2010) J. L. Manley et al.   GENES & DEVELOPMENT

Early abscisic acid signal transduction mechanisms: newly discovered components and newly emerging questions

(2010) K. E. Hubbard et al.   GENES & DEVELOPMENT

Function annotation of the rice transcriptome at single-nucleotide resolution by RNA-seq

(2010) T. Lu et al.   GENOME RESEARCH

A Splicing-Independent Function of SF2/ASF in MicroRNA Processing

(2010) Han Wu et al.   MOLECULAR CELL

Molecular Basis of the Core Regulatory Network in ABA Responses: Sensing, Signaling and Transport

(2010) T. Umezawa et al.   PLANT AND CELL PHYSIOLOGY

The Conserved Splicing Factor SUA Controls Alternative Splicing of the Developmental RegulatorABI3inArabidopsis

(2010) Matteo Sugliani et al.   PLANT CELL

Implementing a Rational and Consistent Nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR Proteins) in Plants

(2010) Andrea Barta et al.   PLANT CELL

ABI4 Mediates Abscisic Acid and Cytokinin Inhibition of Lateral Root Formation by Reducing Polar Auxin Transport in Arabidopsis

(2010) D. Shkolnik-Inbar et al.   PLANT CELL

The Plant-Specific SR45 Protein Negatively Regulates Glucose and ABA Signaling during Early Seedling Development in Arabidopsis

(2010) R. F. Carvalho et al.   PLANT PHYSIOLOGY

Genome-wide mapping of alternative splicing in Arabidopsis thaliana

(2009) S. A. Filichkin et al.   GENOME RESEARCH

SR Proteins in Vertical Integration of Gene Expression from Transcription to RNA Processing to Translation

(2009) Xiang-Yang Zhong et al.   MOLECULAR CELL

Extensive coupling of alternative splicing of pre-mRNAs of serine/arginine (SR) genes with nonsense-mediated decay

(2009) Saiprasad G. Palusa et al.   NEW PHYTOLOGIST

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis ABA-INSENSITIVE (ABI) 4 factor acts as a central transcription activator of the expression of its own gene, and for the induction ofABI5andSBE2.2 genesduring sugar signaling

(2009) Flavia Bossi et al.   PLANT JOURNAL

Stress-induced changes in theArabidopsis thalianatranscriptome analyzed using whole-genome tiling arrays

(2009) Georg Zeller et al.   PLANT JOURNAL

Two Alternatively Spliced Isoforms of the Arabidopsis SR45 Protein Have Distinct Roles during Normal Plant Development

(2009) X.-N. Zhang et al.   PLANT PHYSIOLOGY

The SR protein family of splicing factors: master regulators of gene expression

(2008) Jennifer C. Long et al.   BIOCHEMICAL JOURNAL

Alternative splicing and disease

(2008) Jamal Tazi et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Alternative isoform regulation in human tissue transcriptomes

(2008) Eric T. Wang et al.   NATURE

Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

(2008) Qun Pan et al.   NATURE GENETICS

Arabidopsis Transcriptome Analysis under Drought, Cold, High-Salinity and ABA Treatment Conditions using a Tiling Array

(2008) A. Matsui et al.   PLANT AND CELL PHYSIOLOGY