Integrated -Omics: A Powerful Approach to Understanding the Heterogeneous Lignification of Fibre Crops
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Integrated -Omics: A Powerful Approach to Understanding the Heterogeneous Lignification of Fibre Crops
Authors
Keywords
-
Journal
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 14, Issue 6, Pages 10958-10978
Publisher
MDPI AG
Online
2013-05-25
DOI
10.3390/ijms140610958
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Complete Chemical Analysis of Carmagnola Hemp Hurds and Structural Features of Its Components
- (2014) Stefano Gandolfi et al. BioResources
- Genome wide SNP discovery in flax through next generation sequencing of reduced representation libraries
- (2013) Santosh Kumar et al. BMC GENOMICS
- De novo assembly and characterization of transcriptome using Illumina paired-end sequencing and identification of CesA gene in ramie (Boehmeria nivea L. Gaud)
- (2013) Touming Liu et al. BMC GENOMICS
- RNA interference suppression of lignin biosynthesis increases fermentable sugar yields for biofuel production from field-grown sugarcane
- (2013) Je Hyeong Jung et al. PLANT BIOTECHNOLOGY JOURNAL
- Sense-, antisense- and RNAi-4CL1 regulate soluble phenolic acids, cell wall components and growth in transgenic Populus tomentosa Carr.
- (2013) XiaoMing Tian et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- The interacting MYB75 and KNAT7 transcription factors modulate secondary cell wall deposition both in stems and seed coat in Arabidopsis
- (2013) Apurva Bhargava et al. PLANTA
- Maximizing the Information Content of Experiments in Systems Biology
- (2013) Juliane Liepe et al. PLoS Computational Biology
- Recent Progress in the Development of Metabolome Databases for Plant Systems Biology
- (2013) Atsushi Fukushima et al. Frontiers in Plant Science
- Catalyzing plant science research with RNA-seq
- (2013) Laetitia B. B. Martin et al. Frontiers in Plant Science
- An efficient method for transient gene expression in monocots applied to modify the Brachypodium distachyon cell wall
- (2012) Oksana Fursova et al. ANNALS OF BOTANY
- BESC knowledgebase public portal
- (2012) M. H. Syed et al. BIOINFORMATICS
- Epigallocatechin gallate incorporation into lignin enhances the alkaline delignification and enzymatic saccharification of cell walls
- (2012) Sasikumar Elumalai et al. Biotechnology for Biofuels
- Engineering better biomass-degrading ability into a GH11 xylanase using a directed evolution strategy
- (2012) Letian Song et al. Biotechnology for Biofuels
- Engineering of plants with improved properties as biofuels feedstocks by vessel-specific complementation of xylan biosynthesis mutants
- (2012) Pia Damm Petersen et al. Biotechnology for Biofuels
- Plant Fiber Formation: State of the Art, Recent and Expected Progress, and Open Questions
- (2012) Tatyana Gorshkova et al. CRITICAL REVIEWS IN PLANT SCIENCES
- AtABCG29 Is a Monolignol Transporter Involved in Lignin Biosynthesis
- (2012) Santiago Alejandro et al. CURRENT BIOLOGY
- Can genetic engineering of lignin deposition be accomplished without an unacceptable yield penalty?
- (2012) Nicholas D Bonawitz et al. CURRENT OPINION IN BIOTECHNOLOGY
- Structural Characterization of Wheat Straw Lignin as Revealed by Analytical Pyrolysis, 2D-NMR, and Reductive Cleavage Methods
- (2012) José C. del Río et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- Identification and characterization of miRNAs and their potential targets in flax
- (2012) Godfrey Neutelings et al. JOURNAL OF PLANT PHYSIOLOGY
- COVAIN: a toolbox for uni- and multivariate statistics, time-series and correlation network analysis and inverse estimation of the differential Jacobian from metabolomics covariance data
- (2012) Xiaoliang Sun et al. Metabolomics
- Analysis of 2,297 expressed sequence tags (ESTs) from a cDNA library of flax (Linum ustitatissimum L.) bark tissue
- (2012) Song-Hua Long et al. MOLECULAR BIOLOGY REPORTS
- Deciphering the Enigma of Lignification: Precursor Transport, Oxidation, and the Topochemistry of Lignin Assembly
- (2012) Chang-Jun Liu Molecular Plant
- The Class II KNOX gene KNAT7 negatively regulates secondary wall formation in Arabidopsis and is functionally conserved in Populus
- (2012) Eryang Li et al. NEW PHYTOLOGIST
- Metabolic engineering of novel lignin in biomass crops
- (2012) Ruben Vanholme et al. NEW PHYTOLOGIST
- An Engineered Monolignol 4-O-Methyltransferase Depresses Lignin Biosynthesis and Confers Novel Metabolic Capability in Arabidopsis
- (2012) K. Zhang et al. PLANT CELL
- CHITINASE-LIKE1/POM-POM1 and Its Homolog CTL2 Are Glucan-Interacting Proteins Important for Cellulose Biosynthesis in Arabidopsis
- (2012) C. Sanchez-Rodriguez et al. PLANT CELL
- POM-POM2/CELLULOSE SYNTHASE INTERACTING1 Is Essential for the Functional Association of Cellulose Synthase and Microtubules in Arabidopsis
- (2012) M. Bringmann et al. PLANT CELL
- Protein-Protein and Protein-Membrane Associations in the Lignin Pathway
- (2012) J.-E. Bassard et al. PLANT CELL
- The genome of flax (Linum usitatissimum) assembledde novofrom short shotgun sequence reads
- (2012) Zhiwen Wang et al. PLANT JOURNAL
- Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis
- (2012) Won-Chan Kim et al. PLANT MOLECULAR BIOLOGY
- Natural Hypolignification Is Associated with Extensive Oligolignol Accumulation in Flax Stems
- (2012) R. Huis et al. PLANT PHYSIOLOGY
- Deep Annotation of Populus trichocarpa microRNAs from Diverse Tissue Sets
- (2012) Joshua R. Puzey et al. PLoS One
- Cell Expansion-Mediated Organ Growth Is Affected by Mutations in Three EXIGUA Genes
- (2012) Silvia Rubio-Díaz et al. PLoS One
- Characterization of microRNAs Expressed during Secondary Wall Biosynthesis in Acacia mangium
- (2012) Seong Siang Ong et al. PLoS One
- Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa
- (2012) Q. Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identification of cell wall proteins in the flax (Linum usitatissimum) stem
- (2012) Arnaud Day et al. PROTEOMICS
- Cell wall proteins of flax phloem fibers
- (2012) N. N. Ibragimova et al. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY
- Enhancing alfalfa conversion efficiencies for sugar recovery and ethanol production by altering lignin composition
- (2011) Bruce S. Dien et al. BIORESOURCE TECHNOLOGY
- Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
- (2011) S Samuel Yang et al. BMC GENOMICS
- Cloning and expression analysis of kenaf (Hibiscus cannabinus L.) major lignin and cellulose biosynthesis gene sequences and polymer quantification during plant development
- (2011) Pasquale Chiaiese et al. INDUSTRIAL CROPS AND PRODUCTS
- Structural Characterization of Guaiacyl-rich Lignins in Flax (Linum usitatissimum) Fibers and Shives
- (2011) José C. del Río et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- Tensional stress generation in gelatinous fibres: a review and possible mechanism based on cell-wall structure and composition
- (2011) E. J. Mellerowicz et al. JOURNAL OF EXPERIMENTAL BOTANY
- ABC transporters coordinately expressed during lignification of Arabidopsis stems include a set of ABCBs associated with auxin transport
- (2011) M. Kaneda et al. JOURNAL OF EXPERIMENTAL BOTANY
- Green systems biology — From single genomes, proteomes and metabolomes to ecosystems research and biotechnology
- (2011) Wolfram Weckwerth Journal of Proteomics
- Silencing of 4-coumarate:coenzyme A ligase in switchgrass leads to reduced lignin content and improved fermentable sugar yields for biofuel production
- (2011) Bin Xu et al. NEW PHYTOLOGIST
- OVATE FAMILY PROTEIN4 (OFP4) interaction with KNAT7 regulates secondary cell wall formation in Arabidopsis thaliana
- (2011) Eryang Li et al. PLANT JOURNAL
- NAC domain function and transcriptional control of a secondary cell wall master switch
- (2011) Huanzhong Wang et al. PLANT JOURNAL
- VASCULAR-RELATED NAC-DOMAIN 7 directly regulates the expression of a broad range of genes for xylem vessel formation
- (2011) Masatoshi Yamaguchi et al. PLANT JOURNAL
- Dissection of the Transcriptional Program Regulating Secondary Wall Biosynthesis during Wood Formation in Poplar
- (2011) R. Zhong et al. PLANT PHYSIOLOGY
- Identification of candidate genes in Arabidopsis and Populus cell wall biosynthesis using text-mining, co-expression network analysis and comparative genomics
- (2011) Xiaohan Yang et al. PLANT SCIENCE
- Lignin variability in plant cell walls: Contribution of new models
- (2011) Godfrey Neutelings PLANT SCIENCE
- Redefining plant systems biology: from cell to ecosystem
- (2011) Joost J.B. Keurentjes et al. TRENDS IN PLANT SCIENCE
- Integrative Analysis of Transgenic Alfalfa (Medicago sativa L.) Suggests New Metabolic Control Mechanisms for Monolignol Biosynthesis
- (2011) Yun Lee et al. PLoS Computational Biology
- The draft genome and transcriptome of Cannabis sativa
- (2011) Harm van Bakel et al. GENOME BIOLOGY
- The Genetics of Lignin Biosynthesis: Connecting Genotype to Phenotype
- (2010) Nicholas D. Bonawitz et al. Annual Review of Genetics
- Conserved CA-rich motifs in gene promoters of Pt×tMYB021-responsive secondary cell wall carbohydrate-active enzymes in Populus
- (2010) Anders Winzell et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Paintomics: a web based tool for the joint visualization of transcriptomics and metabolomics data
- (2010) F. Garcia-Alcalde et al. BIOINFORMATICS
- Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray
- (2010) Stéphane Fenart et al. BMC GENOMICS
- Identifying new lignin bioengineering targets: 1. Monolignol-substitute impacts on lignin formation and cell wall fermentability
- (2010) John H. Grabber et al. BMC PLANT BIOLOGY
- Regulation of plant biomass production
- (2010) Taku Demura et al. CURRENT OPINION IN PLANT BIOLOGY
- Cell Wall Lignin is Polymerised by Class III Secretable Plant Peroxidases in Norway Spruce
- (2010) Kurt V. Fagerstedt et al. Journal of Integrative Plant Biology
- Abiotic and Biotic Stresses and Changes in the Lignin Content and Composition in Plants
- (2010) Jullyana Cristina Magalhães Silva Moura et al. Journal of Integrative Plant Biology
- Global Analysis of Direct Targets of Secondary Wall NAC Master Switches in Arabidopsis
- (2010) Ruiqin Zhong et al. Molecular Plant
- Supramolecular Self-Assembled Chaos: Polyphenolic Lignin’s Barrier to Cost-Effective Lignocellulosic Biofuels
- (2010) Komandoor Elayavalli Achyuthan et al. MOLECULES
- ArabidopsisVASCULAR-RELATED NAC-DOMAIN6 Directly Regulates the Genes That Govern Programmed Cell Death and Secondary Wall Formation during Xylem Differentiation
- (2010) Kyoko Ohashi-Ito et al. PLANT CELL
- MYB75 Functions in Regulation of Secondary Cell Wall Formation in the Arabidopsis Inflorescence Stem
- (2010) A. Bhargava et al. PLANT PHYSIOLOGY
- Coordinated Activation of Cellulose and Repression of Lignin Biosynthesis Pathways in Rice
- (2010) M. M. R. Ambavaram et al. PLANT PHYSIOLOGY
- Functional Analysis of the Arabidopsis PAL Gene Family in Plant Growth, Development, and Response to Environmental Stress
- (2010) J. Huang et al. PLANT PHYSIOLOGY
- VASCULAR-RELATED NAC-DOMAIN6 and VASCULAR-RELATED NAC-DOMAIN7 Effectively Induce Transdifferentiation into Xylem Vessel Elements under Control of an Induction System
- (2010) M. Yamaguchi et al. PLANT PHYSIOLOGY
- Characterization of NAC domain transcription factors implicated in control of vascular cell differentiation in Arabidopsis and Populus
- (2010) Emily H. Grant et al. PLANTA
- Distinct cinnamoyl CoA reductases involved in parallel routes to lignin inMedicago truncatula
- (2010) Rui Zhou et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Plant fibers: Initiation, growth, model plants, and open questions
- (2010) Simcha Lev-Yadun RUSSIAN JOURNAL OF PLANT PHYSIOLOGY
- Gene expression in tension wood and bast fibres
- (2010) N. Hobson et al. RUSSIAN JOURNAL OF PLANT PHYSIOLOGY
- Arabidopsis thaliana as a model for gelatinous fiber formation
- (2010) S. E. Wyatt et al. RUSSIAN JOURNAL OF PLANT PHYSIOLOGY
- Specific type of secondary cell wall formed by plant fibers
- (2010) T. A. Gorshkova et al. RUSSIAN JOURNAL OF PLANT PHYSIOLOGY
- Intrusive growth of sclerenchyma fibers
- (2010) A. V. Snegireva et al. RUSSIAN JOURNAL OF PLANT PHYSIOLOGY
- Medicago truncatula as a Model for Dicot Cell Wall Development
- (2009) Mesfin Tesfaye et al. BioEnergy Research
- Integrated omics approaches in plant systems biology
- (2009) Atsushi Fukushima et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- The role of xylem class III peroxidases in lignification
- (2009) K. Marjamaa et al. JOURNAL OF EXPERIMENTAL BOTANY
- Ectopic expression of MYB46 identifies transcriptional regulatory genes involved in secondary wall biosynthesis in Arabidopsis
- (2009) Jae-Heung Ko et al. PLANT JOURNAL
- Free galactose and galactosidase activity in the course of flax fiber development
- (2009) P. V. Mikshina et al. RUSSIAN JOURNAL OF PLANT PHYSIOLOGY
- Microarray Analysis of Developing Flax Hypocotyls Identifies Novel Transcripts Correlated with Specific Stages of Phloem Fibre Differentiation
- (2008) Melissa J. Roach et al. ANNALS OF BOTANY
- Xyloglucan: The Molecular Muscle of Trees
- (2008) Ewa J. Mellerowicz et al. ANNALS OF BOTANY
- The effects of hemicelluloses and lignin removal on water uptake behavior of hemp fibers
- (2008) Biljana M. Pejic et al. BIORESOURCE TECHNOLOGY
- A flax fibre proteome: identification of proteins enriched in bast fibres
- (2008) Naomi SC Hotte et al. BMC PLANT BIOLOGY
- Multi-site genetic modification of monolignol biosynthesis in alfalfa (Medicago sativa): effects on lignin composition in specific cell types
- (2008) Jin Nakashima et al. NEW PHYTOLOGIST
- Harnessing plant biomass for biofuels and biomaterials
- (2008) Christoph Benning et al. PLANT JOURNAL
- Improvement of biomass through lignin modification
- (2008) Xu Li et al. PLANT JOURNAL
- MAP20, a Microtubule-Associated Protein in the Secondary Cell Walls of Hybrid Aspen, Is a Target of the Cellulose Synthesis Inhibitor 2,6-Dichlorobenzonitrile
- (2008) A. S. Rajangam et al. PLANT PHYSIOLOGY
- Homofusion of Golgi secretory vesicles in flax phloem fibers during formation of the gelatinous secondary cell wall
- (2008) Vadim V. Salnikov et al. PROTOPLASMA
- Differential expression of genes involved in C1 metabolism and lignin biosynthesis in wooden core and bast tissues of fibre hemp (Cannabis sativa L.)
- (2007) Hetty C. van den Broeck et al. PLANT SCIENCE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started