Multiple Mechanisms and Challenges for the Application of Allopolyploidy in Plants

Epigenetic Mechanisms Underlying Genomic Imprinting in Plants

(2012) Claudia Köhler et al.   Annual Review of Plant Biology

Genomic expression dominance in allopolyploids

(2012) Ryan A Rapp et al.   BMC BIOLOGY

Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines

(2012) Bao Qi et al.   BMC BIOLOGY

Maternal Control of Nutrient Allocation in Plant Seeds by Genomic Imprinting

(2012) Liliana M. Costa et al.   CURRENT BIOLOGY

N2O induces mitotic polyploidization in anther somatic cells and restores fertility in sterile interspecific hybrid lilies

(2011) Shotarou Nukui et al.   BREEDING SCIENCE

Epigenetic regulation of flowering time in polyploids

(2011) Dustin Mayfield et al.   CURRENT OPINION IN PLANT BIOLOGY

Wheat Hybridization and Polyploidization Results in Deregulation of Small RNAs

(2011) Michal Kenan-Eichler et al.   GENETICS

Differential contributions to the transcriptome of duplicated genes in response to abiotic stresses in natural and synthetic polyploids

(2011) Shaowei Dong et al.   NEW PHYTOLOGIST

Polyploid formation pathways have an impact on genetic rearrangements in resynthesized Brassica napus

(2011) E. Szadkowski et al.   NEW PHYTOLOGIST

Evolution of Polyploid Triticum Wheats under Cultivation: The Role of Domestication, Natural Hybridization and Allopolyploid Speciation in their Diversification

(2011) Y. Matsuoka   PLANT AND CELL PHYSIOLOGY

cis- andtrans-Regulation of miR163 and Target Genes Confers Natural Variation of Secondary Metabolites in TwoArabidopsisSpecies and Their Allopolyploids

(2011) Danny W-K. Ng et al.   PLANT CELL

Genome wide gene expression in artificially synthesized amphidiploids of Arabidopsis

(2011) Ryo Fujimoto et al.   PLANT MOLECULAR BIOLOGY

Proteomic Changes in Newly Synthesized Brassica napus Allotetraploids and Their Early Generations

(2011) Fang Kong et al.   PLANT MOLECULAR BIOLOGY REPORTER

Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus

(2011) Z. Xiong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The self-compatibility mechanism in Brassica napus L. is applicable to F1 hybrid breeding

(2011) Takahiro Tochigi et al.   THEORETICAL AND APPLIED GENETICS

RNA-seq in grain unveils fate of neo- and paleopolyploidization events in bread wheat (Triticum aestivum L.)

(2011) Caroline Pont et al.   GENOME BIOLOGY

Speciation genes in plants

(2010) Loren H. Rieseberg et al.   ANNALS OF BOTANY

Discovery of global genomic re-organization based on comparison of two newly sequenced rice mitochondrial genomes with cytoplasmic male sterility-related genes

(2010) Sota Fujii et al.   BMC GENOMICS

Homoeolog-specific transcriptional bias in allopolyploid wheat

(2010) Alina R Akhunova et al.   BMC GENOMICS

The Production of Polyploid Gametes in Hybrids

(2010) G. D. Karpechenko   HEREDITAS

Trans-acting small RNA determines dominance relationships in Brassica self-incompatibility

(2010) Yoshiaki Tarutani et al.   NATURE

RNAi-mediated down-regulation of DCL1 and AGO1 induces developmental changes in resynthesized Arabidopsis allotetraploids

(2010) Erika Lackey et al.   NEW PHYTOLOGIST

Heterochromatin, small RNA and post-fertilization dysgenesis in allopolyploid and interploid hybrids of Arabidopsis

(2010) Robert A. Martienssen   NEW PHYTOLOGIST

The first meiosis of resynthesized Brassica napus, a genome blender

(2010) E. Szadkowski et al.   NEW PHYTOLOGIST

Newly synthesized wheat allohexaploids display progenitor-dependent meiotic stability and aneuploidy but structural genomic additivity

(2010) Imen Mestiri et al.   NEW PHYTOLOGIST

Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploids

(2010) Véronique Chagué et al.   NEW PHYTOLOGIST

Analysis of gene expression in resynthesized Brassica napus allotetraploids: transcriptional changes do not explain differential protein regulation

(2010) Anne Marmagne et al.   NEW PHYTOLOGIST

Tissue-specific silencing of homoeologs in natural populations of the recent allopolyploid Tragopogon mirus

(2010) Richard J. A. Buggs et al.   NEW PHYTOLOGIST

Analysis of target sequences of DDM1s in Brassica rapa by MSAP

(2010) Taku Sasaki et al.   PLANT CELL REPORTS

The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein

(2010) Etsuko Itabashi et al.   PLANT JOURNAL

Rice interspecies hybrids show precocious or delayed developmental transitions in the endosperm without change to the rate of syncytial nuclear division

(2010) Ryo Ishikawa et al.   PLANT JOURNAL

Variation in Antiherbivore Defense Responses in Synthetic Nicotiana Allopolyploids Correlates with Changes in Uniparental Patterns of Gene Expression

(2010) S. Anssour et al.   PLANT PHYSIOLOGY

Species Selection Maintains Self-Incompatibility

(2010) E. E. Goldberg et al.   SCIENCE

The impact of the triploid block on the origin and evolution of polyploid plants

(2010) Claudia Köhler et al.   TRENDS IN GENETICS

Molecular mechanisms of polyploidy and hybrid vigor

(2010) Z. Jeffrey Chen   TRENDS IN PLANT SCIENCE

Dosage-Dependent Deregulation of an AGAMOUS-LIKE Gene Cluster Contributes to Interspecific Incompatibility

(2009) Harkamal Walia et al.   CURRENT BIOLOGY

Changes of gene expression in early generations of the synthetic allotetraploid Cucumis × hytivus Chen et Kirkbride

(2009) Yong Zhuang et al.   GENETIC RESOURCES AND CROP EVOLUTION

The allotetraploid Arabidopsis thaliana–Arabidopsis lyrata subsp. petraea as an alternative model system for the study of polyploidy in plants

(2009) Julien Beaulieu et al.   MOLECULAR GENETICS AND GENOMICS

Bursts of retrotransposition reproduced in Arabidopsis

(2009) Sayuri Tsukahara et al.   NATURE

Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation

(2009) Lex E. Flagel et al.   NEW PHYTOLOGIST

Genetic regulation of meiosis in polyploid species: new insights into an old question

(2009) Marta Cifuentes et al.   NEW PHYTOLOGIST

Impact of transposable elements on the organization and function of allopolyploid genomes

(2009) Christian Parisod et al.   NEW PHYTOLOGIST

Structure and expression analysis of rice paleo duplications

(2009) M. Throude et al.   NUCLEIC ACIDS RESEARCH

Analysis of Gene Expression in Resynthesized Brassica napus Allopolyploids Using Arabidopsis 70mer Oligo Microarrays

(2009) Robert T. Gaeta et al.   PLoS One

Duplicate genes increase expression diversity in closely related species and allopolyploids

(2009) M. Ha et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids

(2009) M. Ha et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Suppressed expression of RETROGRADE-REGULATED MALE STERILITY restores pollen fertility in cytoplasmic male sterile rice plants

(2009) S. Fujii et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Imprinting of the Polycomb Group Gene MEDEA Serves as a Ploidy Sensor in Arabidopsis

(2009) Aleksandra Erilova et al.   PLoS Genetics

RNAi Mediated Down-Regulation of PDS Gene Expression in Sugarcane (Saccharum), a Highly Polyploid Crop

(2009) Kenji Osabe et al.   Tropical Plant Biology

Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolution

(2008) Lex Flagel et al.   BMC BIOLOGY

Potential for analytic breeding in allopolyploids: an illustration from Longiflorum × Asiatic hybrid lilies (Lilium)

(2008) Nadeem Khan et al.   EUPHYTICA

Nonadditive Expression of Homoeologous Genes Is Established Upon Polyploidization in Hexaploid Wheat

(2008) M. Pumphrey et al.   GENETICS

Chromosomal stability and performance of resynthesized Brassica napus produced for gain in earliness and short-day response

(2008) M. A. AKBAR   HEREDITAS

Multimegabase Silencing in Nucleolar Dominance Involves siRNA-Directed DNA Methylation and Specific Methylcytosine-Binding Proteins

(2008) Sasha B. Preuss et al.   MOLECULAR CELL

Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids

(2008) Zhongfu Ni et al.   NATURE

Genome Barriers between Nuclei and Mitochondria Exemplified by Cytoplasmic Male Sterility

(2008) S. Fujii et al.   PLANT AND CELL PHYSIOLOGY

Characterization of Raphanus sativus Pentatricopeptide Repeat Proteins Encoded by the Fertility Restorer Locus for Ogura Cytoplasmic Male Sterility

(2008) M. Uyttewaal et al.   PLANT CELL

The AGL62 MADS Domain Protein Regulates Cellularization during Endosperm Development in Arabidopsis

(2008) I.-H. Kang et al.   PLANT CELL

Suppression mechanism of mitochondrial ORF79 accumulation by Rf1 protein in BT-type cytoplasmic male sterile rice

(2008) Tomohiko Kazama et al.   PLANT JOURNAL

Hypomethylation and transcriptional reactivation of retrotransposon-like sequences in ddm1 transgenic plants of Brassica rapa

(2008) Ryo Fujimoto et al.   PLANT MOLECULAR BIOLOGY

Efficient silencing of reporter transgenes coupled to known functional promoters in sugarcane, a highly polyploid crop species

(2008) Stephen R. Mudge et al.   PLANTA

Rapid alterations of gene expression and cytosine methylation in newly synthesized Brassica napus allopolyploids

(2008) Yanhao Xu et al.   PLANTA

Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant

(2008) R. Hovav et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sandersonia aurantiaca: Domestication of a new ornamental crop

(2008) G.K. Burge et al.   SCIENTIA HORTICULTURAE

Mechanism of action of nitrous oxide gas applied as a polyploidizing agent during meiosis in lilies

(2008) Satomi Kitamura et al.   SEXUAL PLANT REPRODUCTION

Pentatricopeptide repeat proteins: a socket set for organelle gene expression

(2008) C SCHMITZLINNEWEBER et al.   TRENDS IN PLANT SCIENCE

Angiosperm mitochondrial genomes and mutations

(2007) Tomohiko Kubo et al.   MITOCHONDRION