Transcriptomic Analysis of Phenotypic Changes in Birch (Betula platyphylla) Autotetraploids

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

(2011) Zhangying Wang et al.   BMC GENOMICS

Transcriptome characterization and polymorphism detection between subspecies of big sagebrush (Artemisia tridentata)

(2011) Prabin Bajgain et al.   BMC GENOMICS

TF-Cluster: A pipeline for identifying functionally coordinated transcription factors via network decomposition of the shared coexpression connectivity matrix (SCCM)

(2011) Jeff Nie et al.   BMC Systems Biology

Transcriptome Analysis of the Rhizosphere Bacterium Azospirillum brasilense Reveals an Extensive Auxin Response

(2011) Sandra Van Puyvelde et al.   MICROBIAL ECOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

The main auxin biosynthesis pathway in Arabidopsis

(2011) K. Mashiguchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The auxin influx carriers AUX1 and LAX3 are involved in auxin-ethylene interactions during apical hook development in Arabidopsis thaliana seedlings

(2010) F. Vandenbussche et al.   DEVELOPMENT

Evolutionary consequences of autopolyploidy

(2010) Christian Parisod et al.   NEW PHYTOLOGIST

Impact of natural genetic variation on the transcriptome of autotetraploidArabidopsis thaliana

(2010) Zheng Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Cytological characteristics of numerically unreduced pollen production in Populus tomentosa Carr.

(2009) Zhenghai Zhang et al.   EUPHYTICA

Transcriptional profiling of the pea shoot apical meristem reveals processes underlying its function and maintenance

(2008) Chui E Wong et al.   BMC PLANT BIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Genomic Plasticity and the Diversity of Polyploid Plants

(2008) A. R. Leitch et al.   SCIENCE