Inference of Population History by Coupling Exploratory and Model-Driven Phylogeographic Analyses

Phylogeography and Population Structure of Glossina fuscipes fuscipes in Uganda: Implications for Control of Tsetse

(2010) Jon S. Beadell et al.   PLoS Neglected Tropical Diseases

Arctic‐Alpine Distributions—Metapopulations on a Continental Scale?

(2009) Christoph Muster et al.   AMERICAN NATURALIST

Statistical Phylogeography

(2009) L. Lacey Knowles   Annual Review of Ecology Evolution and Systematics

Toward an organismal, integrative, and iterative phylogeography

(2009) David Buckley   BIOESSAYS

Identification of microsatellites from an extinct moa species using high-throughput (454) sequence data

(2009) Morten E. Allentoft et al.   BIOTECHNIQUES

Testing comparative phylogeographic models of marine vicariance and dispersal using a hierarchical Bayesian approach

(2009) Michael J Hickerson et al.   BMC EVOLUTIONARY BIOLOGY

Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey

(2009) Hindrik HD Kerstens et al.   BMC GENOMICS

What can you do with 0.1× genome coverage? A case study based on a genome survey of the scuttle fly Megaselia scalaris (Phoridae)

(2009) David A Rasmussen et al.   BMC GENOMICS

Mechanistic niche modelling: combining physiological and spatial data to predict species’ ranges

(2009) Michael Kearney et al.   ECOLOGY LETTERS

LEARNING ABOUT MODES OF SPECIATION BY COMPUTATIONAL APPROACHES

(2009) Céline Becquet et al.   EVOLUTION

ISLAND BIOGEOGRAPHY OF GALÁPAGOS LAVA LIZARDS (TROPIDURIDAE:MICROLOPHUS): SPECIES DIVERSITY AND COLONIZATION OF THE ARCHIPELAGO

(2009) Edgar Benavides et al.   EVOLUTION

Isolation and introgression in the Intermountain West: contrasting gene genealogies reveal the complex biogeographic history of the American pika (Ochotona princeps)

(2009) Kurt E. Galbreath et al.   JOURNAL OF BIOGEOGRAPHY

Microsatellites Are Molecular Clocks That Support Accurate Inferences about History

(2009) J. X. Sun et al.   MOLECULAR BIOLOGY AND EVOLUTION

How Robust Are "Isolation with Migration" Analyses to Violations of the IM Model? A Simulation Study

(2009) J. L. Strasburg et al.   MOLECULAR BIOLOGY AND EVOLUTION

Not just vicariance: phylogeography of a Sonoran Desert euphorb indicates a major role of range expansion along the Baja peninsula

(2009) R. C. GARRICK et al.   MOLECULAR ECOLOGY

The circular definition of populations and its implications for biological sampling

(2009) THOMAS D. HARWOOD   MOLECULAR ECOLOGY

An information-theoretical approach to phylogeography

(2009) BRYAN C. CARSTENS et al.   MOLECULAR ECOLOGY

Phylogenetic endemism: a new approach for identifying geographical concentrations of evolutionary history

(2009) DAN ROSAUER et al.   MOLECULAR ECOLOGY

Do landscape processes predict phylogeographic patterns in the wood frog?

(2009) JULIE A. LEE-YAW et al.   MOLECULAR ECOLOGY

Disentangling the effects of historic vs. contemporary landscape structure on population genetic divergence

(2009) A. J. ZELLMER et al.   MOLECULAR ECOLOGY

Statistical inferences in phylogeography

(2009) RASMUS NIELSEN et al.   MOLECULAR ECOLOGY

Inferring the past to predict the future: climate modelling predictions and phylogeography for the freshwater gastropodRadix balthica(Pulmonata, Basommatophora)

(2009) M. CORDELLIER et al.   MOLECULAR ECOLOGY

The influence of family groups on inferences made with the program Structure

(2009) E. C. ANDERSON et al.   Molecular Ecology Resources

Quantification and reduction of bias from sampling larvae to infer population and landscape genetic structure

(2009) CAREN S. GOLDBERG et al.   Molecular Ecology Resources

Phylogeography’s past, present, and future: 10 years after Avise, 2000

(2009) M.J. Hickerson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Mitochondrial DNA Indicates Late Pleistocene Divergence of Populations of Heteronympha merope, an Emerging Model in Environmental Change Biology

(2009) Melanie Norgate et al.   PLoS One

SNP discovery in swine by reduced representation and high throughput pyrosequencing

(2008) Ralph T Wiedmann et al.   BMC GENETICS

DIVERGENCE ACROSS AUSTRALIA'S CARPENTARIAN BARRIER: STATISTICAL PHYLOGEOGRAPHY OF THE RED-BACKED FAIRY WREN (MALURUS MELANOCEPHALUS)

(2008) June Y. Lee et al.   EVOLUTION

DISTINGUISHING COEVOLUTION FROM COVICARIANCE IN AN OBLIGATE POLLINATION MUTUALISM: ASYNCHRONOUS DIVERGENCE IN JOSHUA TREE AND ITS POLLINATORS

(2008) Christopher Irwin Smith et al.   EVOLUTION

FINE-SCALE PHYLOGEOGRAPHIC CONGRUENCE DESPITE DEMOGRAPHIC INCONGRUENCE IN TWO LOW-MOBILITY SAPROXYLIC SPRINGTAILS

(2008) Ryan C. Garrick et al.   EVOLUTION

A MULTILOCUS TEST OF SIMULTANEOUS DIVERGENCE ACROSS THE ISTHMUS OF PANAMA USING SNAPPING SHRIMP IN THE GENUSALPHEUS

(2008) Carla Hurt et al.   EVOLUTION

Climatic fluctuations shape the phylogeography of a mesic direct-developing frog from the south-western Australian biodiversity hotspot

(2008) Danielle L. Edwards et al.   JOURNAL OF BIOGEOGRAPHY

Geological Dates and Molecular Rates: Fish DNA Sheds Light on Time Dependency

(2008) C. P. Burridge et al.   MOLECULAR BIOLOGY AND EVOLUTION

Combining direct and indirect genetic methods to estimate dispersal for informing wildlife disease management decisions

(2008) C. I. CULLINGHAM et al.   MOLECULAR ECOLOGY

Babies and bathwater: a comment on the premature obituary for nested clade phylogeographical analysis

(2008) R. C. GARRICK et al.   MOLECULAR ECOLOGY

The evolution of sexual and parthenogeneticWarramaba: a window onto Plio-Pleistocene diversification processes in an arid biome

(2008) MICHAEL KEARNEY et al.   MOLECULAR ECOLOGY

Statistical hypothesis testing in intraspecific phylogeography: nested clade phylogeographical analysis vs. approximate Bayesian computation

(2008) ALAN R. TEMPLETON   MOLECULAR ECOLOGY

In situ genetic differentiation in a Hispaniolan lizard (Ameiva chrysolaema): A multilocus perspective

(2008) Matthew E. Gifford et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Does gene flow destroy phylogenetic signal? The performance of three methods for estimating species phylogenies in the presence of gene flow

(2008) A ECKERT et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Historical DNA analysis reveals living descendants of an extinct species of Galapagos tortoise

(2008) N. Poulakakis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Network analysis identifies weak and strong links in a metapopulation system

(2008) A. F. Rozenfeld et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Likelihood Framework for Estimating Phylogeographic History on a Continuous Landscape

(2008) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Discordance of Species Trees with Their Most Likely Gene Trees: The Case of Five Taxa

(2008) Noah A. Rosenberg et al.   SYSTEMATIC BIOLOGY

Surfing during population expansions promotes genetic revolutions and structuration

(2008) Laurent Excoffier et al.   TRENDS IN ECOLOGY & EVOLUTION

Coalescent genealogy samplers: windows into population history

(2008) Mary K. Kuhner   TRENDS IN ECOLOGY & EVOLUTION

COMPUTER PROGRAMS: onesamp: a program to estimate effective population size using approximate Bayesian computation

(2007) DAVID A. TALLMON et al.   Molecular Ecology Resources

Did the Pleistocene glaciations promote divergence? Tests of explicit refugial models in montane grasshopprers

(2003) L. Lacey Knowles   MOLECULAR ECOLOGY