4.2 Article

Use of optical tweezers technology for long-term, focal stimulation of specific subcellular neuronal compartments

Journal

INTEGRATIVE BIOLOGY
Volume 3, Issue 5, Pages 568-577

Publisher

ROYAL SOC CHEMISTRY
DOI: 10.1039/c0ib00102c

Keywords

-

Categories

Funding

  1. EU [214566, 212348]

Ask authors/readers for more resources

Spatial regulation of secretory molecule release is a sophisticated mechanism used by the nervous system to control network development and finely tune the activity of each synapse. Great efforts have been made to develop techniques that mimic secretory molecule release with the aim of stimulating neurons as close as possible to physiological conditions. However, current techniques have poor spatial resolution or low flexibility. Here, we propose a novel approach to achieve focal and prolonged stimulation of neurons using optical tweezers and single microbeads functionalized with a secretory molecule, the neurotrophin brain-derived neurotrophic factor (BDNF). BDNF is a key regulator of neuronal development and plasticity. We show that single BDNF-coated microbeads can be extracted with optical tweezers from small reservoirs and positioned with submicrometric precision to specific sites on the dendrites of cultured hippocampal neurons. Localized contact of microbeads functionalized with BDNF, but not with bovine serum albumin (BSA), induced focal increase of calcium signaling in the stimulated dendrite, specific activation of the TrkB receptor pathway and influenced the development of growth cones. Remarkably, a single BDNF-coated bead localized on a dendrite was found to be enough for TrkB phosphorylation, an efficient and long-lasting activation of calcium signaling in the soma, and c-Fos signaling in the nucleus, comparable to bath stimulation conditions. These findings support the use of optical tweezer technology for long-term, localized stimulation of specific subcellular neuronal compartments.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.2
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Biochemistry & Molecular Biology

Advanced photodynamic therapy with an engineered M13 phage targeting EGFR: Mitochondrial localization and autophagy induction in ovarian cancer cell lines

Barbara Bortot, Maura Apollonio, Gabriele Baj, Laura Andolfi, Luisa Zupin, Sergio Crovella, Matteo di Giosia, Andrea Cantelli, Roberto Saporetti, Luca Ulfo, Annapaola Petrosino, Giovanni Di Lorenzo, Federico Romano, Giuseppe Ricci, Maurizio Mongiat, Alberto Danielli, Matteo Calvaresi, Stefania Biffi

Summary: This study proposes a bacteriophage-based receptor targeted photodynamic therapy for treating EGFR-positive ovarian cancer. The modified M13 bacteriophage with an EGFR binding peptide displayed on its surface effectively kills cancer cells through ROS generation by photosensitizers. It also downregulates EGFR expression and induces autophagy.

FREE RADICAL BIOLOGY AND MEDICINE (2022)

Article Chemistry, Physical

Modelling the adsorption of proteins to nanoparticles at the solid-liquid interface

Mikhail Soloviev, Giuliano Siligardi, Danilo Roccatano, Enrico Ferrari

Summary: A new geometrical model was developed to study the adsorption of proteins on nanoparticles, and findings showed a 32% surface occupancy of RBD on silica nanoparticles with 25% of RBD secondary structures undergoing conformational changes. These findings contribute to understanding protein-surface interactions and controlling the spread of SARS-CoV-2 through contaminated objects.

JOURNAL OF COLLOID AND INTERFACE SCIENCE (2022)

Article Multidisciplinary Sciences

Mechanotransduction in hippocampal neurons operates under localized low picoNewton forces

Fabio Falleroni, Ulisse Bocchero, Simone Mortal, Yunzhen Li, Zhongjie Ye, Dan Cojoc, Vincent Torre

Summary: There is growing evidence that the mechanical properties of neurons play a crucial role in cellular processes. This study found that neurons are able to distinguish the magnitude of mechanical stimuli and respond with changes in intracellular calcium levels. Mechanically evoked responses require the influx of extracellular calcium through transmembrane ion channels. Furthermore, mechanical stimulation activates certain proteins involved in cellular signaling.

ISCIENCE (2022)

Article Chemistry, Multidisciplinary

Regulation of Substrate Dissipation via Tunable Linear Elasticity Controls Cell Activity

Pasquale Sacco, Francesco Piazza, Chiara Pizzolitto, Gabriele Baj, Francesco Brun, Eleonora Marsich, Ivan Donati

Summary: This study presents a strategy to control the dissipation rate of viscoplastic substrates while precisely regulating linear elasticity, and reveals the crucial link between this material property and cellular responses in 2D cultures.

ADVANCED FUNCTIONAL MATERIALS (2022)

Article Biochemistry & Molecular Biology

The Role of Cytoskeleton Revealed by Quartz Crystal Microbalance and Digital Holographic Microscopy

Nicoletta Braidotti, Maria Augusta do R. B. F. Lima, Michele Zanetti, Alessandro Rubert, Catalin Ciubotaru, Marco Lazzarino, Orfeo Sbaizero, Dan Cojoc

Summary: This study investigates the relationship between cytoskeleton alterations and diseases through examining primary rat cardiac fibroblasts. The results show that changes in the cytoskeleton can affect cell adhesion, rheological behavior, and morphology.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)

Article Biotechnology & Applied Microbiology

Fludarabine increases nuclease-free AAV- and CRISPR/Cas9-mediated homologous recombination in mice

Shinnosuke Tsuji, Calvin J. Stephens, Giulia Bortolussi, Feijie Zhang, Gabriele Baj, Hagoon Jang, Gustavo de Alencastro, Andres F. Muro, Katja Pekrun, Mark A. Kay

Summary: The use of ribonucleotide reductase inhibitors can substantially enhance the efficiency of adeno-associated virus-mediated homologous recombination-based gene therapy. These findings suggest that clinically approved inhibitors, such as fludarabine, can be used to potentiate gene editing therapies.

NATURE BIOTECHNOLOGY (2022)

Article Biochemistry & Molecular Biology

Environmentally Acquired Bacillus and Their Role in C. difficile Colonization Resistance

William T. Ferreira, Huynh A. Hong, James R. G. Adams, Mateusz Hess, Natalia K. Kotowicz, Sisareuth Tan, Enrico Ferrari, Alain Brisson, Jurgen Zentek, Mikhail Soloviev, Simon M. Cutting

Summary: Clostridioides difficile is a spore-forming bacterium that causes disease after disruption of the intestinal microbiota. This study demonstrates the role of Bacillus in colonization resistance to C. difficile. Animals with reduced environmental exposure are more susceptible to CDI due to a loss of Bacillus. Heterogeneous lipopeptide lytic micelles (HELMs) produced by Bacillus in the small intestine enhance inhibitory activity against C. difficile.

BIOMEDICINES (2022)

Review Biochemistry & Molecular Biology

Piezo1 Channel as a Potential Target for Hindering Cardiac Fibrotic Remodeling

Nicoletta Braidotti, Suet Nee Chen, Carlin S. Long, Dan Cojoc, Orfeo Sbaizero

Summary: This review presents recent discoveries regarding the role of the mechanosensitive ion channel Piezo1 in various diseases, particularly in tumor progression and cardiac mechanobiology. Based on recent findings, Piezo1 could be upregulated in cardiac fibroblasts due to mechanical stress and pro-inflammatory stimuli after myocardial injury, leading to fibrosis progression.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)

Article Genetics & Heredity

Rational Approach to Finding Genes Encoding Molecular Biomarkers: Focus on Breast Cancer

Nathalie Schneider, Ellen Reed, Faddy Kamel, Enrico Ferrari, Mikhail Soloviev

Summary: This study predicts molecular biomarkers for breast cancer using a data mining approach. It explores the relationship between subtype-specific and pan-cancer biomarkers and suggests potential extracellular markers for early non-invasive detection of the disease.

GENES (2022)

Article Biochemistry & Molecular Biology

Neuroprotective Properties of Cardoon Leaves Extracts against Neurodevelopmental Deficits in an In Vitro Model of Rett Syndrome Depend on the Extraction Method and Harvest Time

Mariachiara Spennato, Ottavia Maria Roggero, Simona Varriale, Fioretta Asaro, Angelo Cortesi, Jan Kaspar, Enrico Tongiorgi, Cinzia Pezzella, Lucia Gardossi

Summary: This study investigates the bioactive properties of different extracts of cardoon leaves in rescuing neuronal development arrest in an in vitro model of Rett syndrome. The results suggest that extracts from cardoon leaves harvested in different seasons have varied effects on neuronal development, with autumn harvest extracts containing more bioactive molecules. Cynaropicrin and lupeol may have neurotoxic effects, while squalene and 3ss-taraxerol may promote neuronal development.

MOLECULES (2022)

Article Biochemical Research Methods

Quality Control of Gene Expression Data Allows Accurate Quantification of Differentially Expressed Biological Pathways

Ellen Reed, Enrico Ferrari, Mikhail Soloviev

Summary: This study aimed to address issues related to the quality of gene expression data and devise improved quality control and data processing procedures. Linear regression analysis was used to process gene expression datasets, resulting in an increase in the number of identifiable differentially regulated genes and a reduction in false positives. The approach reduced technical errors and improved the accuracy and precision of determining the degree of differential gene expression.

CURRENT BIOINFORMATICS (2023)

Review Chemistry, Analytical

Gold Nanoparticle-Based Plasmonic Biosensors

Enrico Ferrari

Summary: One of the emerging technologies in molecular diagnostics is the use of gold nanoparticles (AuNPs) for biosensors. AuNPs can be functionalized with biomolecules to recognize and bind specific targets. AuNPs have unique optical properties, such as a distinctive plasmonic band and high extinction coefficient, which allow for visual detection even at low concentrations. This review focuses on the design and molecular mechanisms of AuNP-based plasmonic biosensors, highlighting their applications in point-of-care testing for various analytes.

BIOSENSORS-BASEL (2023)

Article Engineering, Biomedical

Controlled Quenching of Agarose Defines Hydrogels with Tunable Structural, Bulk Mechanical, Surface Nanomechanical, and Cell Response in 2D Cultures

Francesco Piazza, Pietro Parisse, Julia Passerino, Eleonora Marsich, Luca Bersanini, Davide Porrelli, Gabriele Baj, Ivan Donati, Pasquale Sacco

Summary: The rate of cooling after heating is crucial for the structure and performance of agarose hydrogel networks. This study presents a material strategy for the fine modulation of quenching during the temperature-curing steps of agarose, revealing insights into the accumulation and recovery of agarose on the surface. The temperature curing of agarose allows for the production of networks with tunable mechanics and is suitable for mechanobiology studies.

ADVANCED HEALTHCARE MATERIALS (2023)

Article Chemistry, Multidisciplinary

Multivariate Analysis of Protein-Nanoparticle Binding Data Reveals a Selective Effect of Nanoparticle Material on the Formation of Soft Corona

Susannah Emily Cornwell, Sarah Ogechukwu Okocha, Enrico Ferrari

Summary: This study used dynamic light scattering to determine the dissociation constant and thickness of the protein corona formed in solutions of silica or gold nanoparticles mixed with different types of proteins. The results showed that the nanoparticle material had a greater impact on binding properties than the protein type, and serum albumin had a distinct binding pattern compared to other proteins. This pilot study provides a blueprint for future investigations into the complexity of the soft protein corona, which is crucial for the development of nanomedicines.

NANOMATERIALS (2023)

Article Oncology

The Tumor Suppressor DAB2IP Is Regulated by Cell Contact and Contributes to YAP/TAZ Inhibition in Confluent Cells

Mattia Apollonio, Arianna Bellazzo, Nicoletta Franco, Silvia Lombardi, Beatrice Senigagliesi, Loredana Casalis, Pietro Parisse, Agnes Thalhammer, Gabriele Baj, Rossella De Florian Fania, Giannino Del Sal, Licio Collavin

Summary: External and internal mechanical forces influence cell morphology, movement, proliferation and metabolism, playing a crucial role in tissue homeostasis. Transcriptional regulators YAP and TAZ are important in mechanical signaling and frequently overactive in solid tumors, leading to cancer aggressiveness. DAB2IP, a tumor suppressor, negatively regulates multiple pathways and is often inactivated in cancer. Our study reveals that DAB2IP levels depend on cell density, modulates cell morphology and stiffness, and inhibits YAP/TAZ activity. Thus, DAB2IP may function as a sensor of cellular interactions, restraining oncogenic signaling pathways in intact tissues.

CANCERS (2023)

No Data Available