Fast Parallel Markov Clustering in Bioinformatics Using Massively Parallel Computing on GPU with CUDA and ELLPACK-R Sparse Format

The GPU Computing Era

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Highly accelerated feature detection in proteomics data sets using modern graphics processing units

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Many-core algorithms for statistical phylogenetics

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Parallelized pairwise sequence alignment using CUDA on multiple GPUs

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Markov clustering versus affinity propagation for the partitioning of protein interaction graphs

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NVIDIA Tesla: A Unified Graphics and Computing Architecture

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Graph Clustering Via a Discrete Uncoupling Process

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