RRBS-Analyser: A Comprehensive Web Server for Reduced Representation Bisulfite Sequencing Data Analysis
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Title
RRBS-Analyser: A Comprehensive Web Server for Reduced Representation Bisulfite Sequencing Data Analysis
Authors
Keywords
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Journal
HUMAN MUTATION
Volume 34, Issue 12, Pages 1606-1610
Publisher
Wiley
Online
2013-10-08
DOI
10.1002/humu.22444
References
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Related references
Note: Only part of the references are listed.- BRAT-BW: efficient and accurate mapping of bisulfite-treated reads
- (2012) Elena Y. Harris et al. BIOINFORMATICS
- SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing
- (2012) Zhifu Sun et al. BIOINFORMATICS
- GBSA: a comprehensive software for analysing whole genome bisulfite sequencing data
- (2012) Touati Benoukraf et al. NUCLEIC ACIDS RESEARCH
- EpiExplorer: live exploration and global analysis of large epigenomic datasets
- (2012) Konstantin Halachev et al. GENOME BIOLOGY
- BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions
- (2012) Kasper D Hansen et al. GENOME BIOLOGY
- methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles
- (2012) Altuna Akalin et al. GENOME BIOLOGY
- Methyl-Analyzer—whole genome DNA methylation profiling
- (2011) Yurong Xin et al. BIOINFORMATICS
- Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
- (2011) Felix Krueger et al. BIOINFORMATICS
- RRBSMAP: a fast, accurate and user-friendly alignment tool for reduced representation bisulfite sequencing
- (2011) Yuanxin Xi et al. BIOINFORMATICS
- Systematic assessment of reduced representation bisulfite sequencing to human blood samples: A promising method for large-sample-scale epigenomic studies
- (2011) Li Wang et al. JOURNAL OF BIOTECHNOLOGY
- Studying the epigenome using next generation sequencing
- (2011) C. S. Ku et al. JOURNAL OF MEDICAL GENETICS
- QDMR: a quantitative method for identification of differentially methylated regions by entropy
- (2011) Yan Zhang et al. NUCLEIC ACIDS RESEARCH
- Next generation sequencing in epigenetics: Insights and challenges
- (2011) Emma Meaburn et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massively parallel DNA sequencing
- (2010) Cristian Coarfa et al. BMC BIOINFORMATICS
- BS Seeker: precise mapping for bisulfite sequencing
- (2010) Pao-Yang Chen et al. BMC BIOINFORMATICS
- Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
- (2010) R Alan Harris et al. NATURE BIOTECHNOLOGY
- The DNA Methylome of Human Peripheral Blood Mononuclear Cells
- (2010) Yingrui Li et al. PLOS BIOLOGY
- Updates to the RMAP short-read mapping software
- (2009) A. D. Smith et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Human DNA methylomes at base resolution show widespread epigenomic differences
- (2009) Ryan Lister et al. NATURE
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