Quantitative single-molecule localization microscopy combined with rule-based modeling reveals ligand-induced TNF-R1 reorganization toward higher-order oligomers

A simple method to estimate the average localization precision of a single-molecule localization microscopy experiment

(2014) Ulrike Endesfelder et al.   HISTOCHEMISTRY AND CELL BIOLOGY

1,8-Cineol inhibits nuclear translocation of NF-κB p65 and NF-κB-dependent transcriptional activity

(2013) Johannes F.-W. Greiner et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Receptor-Ligand Interactions: Binding Affinities Studied by Single-Molecule and Super-Resolution Microscopy on Intact Cells

(2013) Marina S. Dietz et al.   CHEMPHYSCHEM

Cell type-specific nuclear pores: a case in point for context-dependent stoichiometry of molecular machines

(2013) A. Ori et al.   Molecular Systems Biology

Antagonistic TNF Receptor One-Specific Antibody (ATROSAB): Receptor Binding and In Vitro Bioactivity

(2013) Fabian Richter et al.   PLoS One

Counting molecules in single organelles with superresolution microscopy allows tracking of the endosome maturation trajectory

(2013) E. M. Puchner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-molecule photobleaching reveals increased MET receptor dimerization upon ligand binding in intact cells

(2013) Marina S Dietz et al.   BMC Biophysics

Super-Resolution Microscopy Reveals Specific Recruitment of HIV-1 Envelope Proteins to Viral Assembly Sites Dependent on the Envelope C-Terminal Tail

(2013) Walter Muranyi et al.   PLoS Pathogens

Optical Nanoscopy: From Acquisition to Analysis

(2012) Travis J. Gould et al.   Annual Review of Biomedical Engineering

Binding Efficiency of Protein–Protein Complexes

(2012) Eric S. Day et al.   BIOCHEMISTRY

TNFR1 Signaling Is Associated with Backbone Conformational Changes of Receptor Dimers Consistent with Overactivation in the R92Q TRAPS Mutant

(2012) Andrew K. Lewis et al.   BIOCHEMISTRY

TNF-α influences the lateral dynamics of TNF receptor I in living cells

(2012) Meike Heidbreder et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Single-molecule coordinate-based analysis of the morphology of HIV-1 assembly sites with near-molecular spatial resolution

(2012) Sebastian Malkusch et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Tumor Necrosis Factor-related Apoptosis-inducing Ligand (TRAIL) Induces Death Receptor 5 Networks That Are Highly Organized

(2012) Christopher C. Valley et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

rapidSTORM: accurate, fast open-source software for localization microscopy

(2012) Steve Wolter et al.   NATURE METHODS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Counting single photoactivatable fluorescent molecules by photoactivated localization microscopy (PALM)

(2012) S.-H. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative single-molecule microscopy reveals that CENP-ACnp1 deposition occurs during G2 in fission yeast

(2012) D. Lando et al.   Open Biology

Molecular Interaction Studies Using Microscale Thermophoresis

(2011) Moran Jerabek-Willemsen et al.   ASSAY AND DRUG DEVELOPMENT TECHNOLOGIES

TNFR1-induced activation of the classical NF-κB pathway

(2011) Harald Wajant et al.   FEBS Journal

Coordinate-based colocalization analysis of single-molecule localization microscopy data

(2011) Sebastian Malkusch et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Chemically Induced Photoswitching of Fluorescent Probes—A General Concept for Super-Resolution Microscopy

(2011) Ulrike Endesfelder et al.   MOLECULES

Probing protein heterogeneity in the plasma membrane using PALM and pair correlation analysis

(2011) Prabuddha Sengupta et al.   NATURE METHODS

Quantitative Photo Activated Localization Microscopy: Unraveling the Effects of Photoblinking

(2011) Paolo Annibale et al.   PLoS One

Optical Thermophoresis for Quantifying the Buffer Dependence of Aptamer Binding

(2010) Philipp Baaske et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Single chain TNF derivatives with individually mutated receptor binding sites reveal differential stoichiometry of ligand receptor complex formation for TNFR1 and TNFR2

(2010) Verena Boschert et al.   CELLULAR SIGNALLING

Efficient modeling, simulation and coarse-graining of biological complexity with NFsim

(2010) Michael W Sneddon et al.   NATURE METHODS

Molecular mechanisms of necroptosis: an ordered cellular explosion

(2010) Peter Vandenabeele et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Oxidative Stress Promotes Ligand-independent and Enhanced Ligand-dependent Tumor Necrosis Factor Receptor Signaling

(2008) Hatice Z. Ozsoy et al.   JOURNAL OF BIOLOGICAL CHEMISTRY