Identification of Multiple QTL Hotspots in Sockeye Salmon (Oncorhynchus nerka) Using Genotyping-by-Sequencing and a Dense Linkage Map

Effects of Crossovers Between Homeologs on Inheritance and Population Genomics in Polyploid-Derived Salmonid Fishes

(2015) F. W. Allendorf et al.   JOURNAL OF HEREDITY

Linkage mapping with paralogs exposes regions of residual tetrasomic inheritance in chum salmon (Oncorhynchus keta)

(2015) R. K. Waples et al.   Molecular Ecology Resources

An integrated linkage map reveals candidate genes underlying adaptive variation in Chinook salmon (Oncorhynchus tshawytscha)

(2015) G. J. McKinney et al.   Molecular Ecology Resources

Linkage Mapping Reveals Strong Chiasma Interference in Sockeye Salmon: Implications for Interpreting Genomic Data

(2015) Morten T. Limborg et al.   G3-Genes Genomes Genetics

Detection and mapping of QTL for temperature tolerance and body size in Chinook salmon (Oncorhynchus tshawytscha) using genotyping by sequencing

(2014) Meredith V. Everett et al.   Evolutionary Applications

Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha)

(2014) Wesley A. Larson et al.   Evolutionary Applications

Infectious disease, shifting climates, and opportunistic predators: cumulative factors potentially impacting wild salmon declines

(2014) Kristina M. Miller et al.   Evolutionary Applications

Genome-wide SNP analysis reveals a genetic basis for sea-age variation in a wild population of Atlantic salmon (Salmo salar)

(2014) Susan E. Johnston et al.   MOLECULAR ECOLOGY

Genetic basis of continuous variation in the levels and modular inheritance of pigmentation in cichlid fishes

(2014) R. Craig Albertson et al.   MOLECULAR ECOLOGY

A Dense Linkage Map for Chinook salmon ( Oncorhynchus tshawytscha ) Reveals Variable Chromosomal Divergence After an Ancestral Whole Genome Duplication Event

(2014) Marine S. O. Brieuc et al.   G3-Genes Genomes Genetics

Comparative Mapping Between Coho Salmon (Oncorhynchus kisutch) and Three Other Salmonids Suggests a Role for Chromosomal Rearrangements in the Retention of Duplicated Regions Following a Whole Genome Duplication Event

(2014) M. Kodama et al.   G3-Genes Genomes Genetics

Lep-MAP: fast and accurate linkage map construction for large SNP datasets

(2013) Pasi Rastas et al.   BIOINFORMATICS

Exploiting genetic diversity to balance conservation and harvest of migratory salmon

(2013) Tyler H. Dann et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

THE GENETIC ARCHITECTURE OF REPRODUCTIVE ISOLATION DURING SPECIATION-WITH-GENE-FLOW IN LAKE WHITEFISH SPECIES PAIRS ASSESSED BY RAD SEQUENCING

(2013) Pierre-Alexandre Gagnaire et al.   EVOLUTION

Entering the second century of maize quantitative genetics

(2013) J G Wallace et al.   HEREDITY

Detection of Quantitative Trait Loci (QTL) Related to Grilsing and Late Sexual Maturation in Atlantic Salmon (Salmo salar)

(2013) Alejandro P. Gutierrez et al.   MARINE BIOTECHNOLOGY

Genomic dissection of variation in clutch size and egg mass in a wild great tit (Parus major) population

(2013) Anna W. Santure et al.   MOLECULAR ECOLOGY

One quantitative trait locus for intra- and interspecific variation in a sex pheromone

(2013) A. T. Groot et al.   MOLECULAR ECOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Genetic Architecture of Migration-Related Traits in Rainbow and Steelhead Trout, Oncorhynchus mykis s

(2013) Benjamin C. Hecht et al.   G3-Genes Genomes Genetics

Meiotic maps of sockeye salmon derived from massively parallel DNA sequencing

(2012) Meredith V Everett et al.   BMC GENOMICS

Dead fish swimming: a review of research on the early migration and high premature mortality in adult Fraser River sockeye salmon Oncorhynchus nerka

(2012) S. G. Hinch et al.   JOURNAL OF FISH BIOLOGY

Journal of Heredity Adopts Joint Data Archiving Policy

(2012) C. S. Baker   JOURNAL OF HEREDITY

A Critical Assessment of Storytelling: Gene Ontology Categories and the Importance of Validating Genomic Scans

(2012) Pavlos Pavlidis et al.   MOLECULAR BIOLOGY AND EVOLUTION

Population genomics and the causes of local differentiation

(2012) Stephen J. Tonsor   MOLECULAR ECOLOGY

Mapping phenotypic, expression and transmission ratio distortion QTL using RAD markers in the Lake Whitefish(Coregonus clupeaformis)

(2012) Pierre-Alexandre Gagnaire et al.   MOLECULAR ECOLOGY

Rank and Order: Evaluating the Performance of SNPs for Individual Assignment in a Non-Model Organism

(2012) Caroline G. Storer et al.   PLoS One

A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns

(2011) Sigbjørn Lien et al.   BMC GENOMICS

The Sockeye Salmon Neo-Y Chromosome Is a Fusion between Linkage Groups Orthologous to the Coho Y Chromosome and the Long Arm of Rainbow Trout Chromosome 2

(2011) J. Faber-Hammond et al.   CYTOGENETIC AND GENOME RESEARCH

A conserved haplotype controls parallel adaptation in geographically distant salmonid populations

(2011) MICHAEL R. MILLER et al.   MOLECULAR ECOLOGY

Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales

(2011) MATT J. SMITH et al.   Molecular Ecology Resources

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

Local De Novo Assembly of RAD Paired-End Contigs Using Short Sequencing Reads

(2011) Paul D. Etter et al.   PLoS One

Differences in Thermal Tolerance Among Sockeye Salmon Populations

(2011) E. J. Eliason et al.   SCIENCE

Population diversity and the portfolio effect in an exploited species

(2010) Daniel E. Schindler et al.   NATURE

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

Fulton's body condition factor K correlates with survival time in a thermal challenge experiment in juvenile Lahontan cutthroat trout (Oncorhynchus clarki henshawi)

(2008) M.L. Robinson et al.   JOURNAL OF THERMAL BIOLOGY

The genetic mosaic suggests a new role for hitchhiking in ecological speciation

(2008) SARA VIA et al.   MOLECULAR ECOLOGY

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One

Insulin modulates norepinephrine-mediated melatonin synthesis in cultured rat pineal gland

(2007) Rodrigo Antonio Peliciari Garcia et al.   LIFE SCIENCES