Application of next-generation sequencing technology to study genetic diversity and identify unique SNP markers in bread wheat from Kazakhstan

Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array

(2014) Shichen Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

Ancient hybridizations among the ancestral genomes of bread wheat

(2014) T. Marcussen et al.   SCIENCE

SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors

(2013) Jing Ren et al.   BMC EVOLUTIONARY BIOLOGY

Genetic Diversity Revealed by Single Nucleotide Polymorphism Markers in a Worldwide Germplasm Collection of Durum Wheat

(2013) Jing Ren et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

SNPMeta: SNP annotation and SNP metadata collection without a reference genome

(2013) Thomas J. Y. Kono et al.   Molecular Ecology Resources

Aegilops tauschiisingle nucleotide polymorphisms shed light on the origins of wheat D-genome genetic diversity and pinpoint the geographic origin of hexaploid wheat

(2013) Jirui Wang et al.   NEW PHYTOLOGIST

Sequence-based SNP genotyping in durum wheat

(2013) Remco M.P. van Poecke et al.   PLANT BIOTECHNOLOGY JOURNAL

Impact of Marker Ascertainment Bias on Genomic Selection Accuracy and Estimates of Genetic Diversity

(2013) Nicolas Heslot et al.   PLoS One

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor

(2013) M.-C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars

(2013) C. R. Cavanagh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide marker development for the wheat D genome based on single nucleotide polymorphisms identified from transcripts in the wild wheat progenitor Aegilops tauschii

(2013) Julio Cesar Masaru Iehisa et al.   THEORETICAL AND APPLIED GENETICS

Population structure, genetic diversity and linkage disequilibrium in elite winter wheat assessed with SNP and SSR markers

(2013) Tobias Würschum et al.   THEORETICAL AND APPLIED GENETICS

Next-generation sequencing applications for wheat crop improvement

(2012) Paul J. Berkman et al.   AMERICAN JOURNAL OF BOTANY

CerealsDB 2.0: an integrated resource for plant breeders and scientists

(2012) Paul A Wilkinson et al.   BMC BIOINFORMATICS

Combining SNP discovery from next-generation sequencing data with bulked segregant analysis (BSA) to fine-map genes in polyploid wheat

(2012) Martin Trick et al.   BMC PLANT BIOLOGY

Targeted re-sequencing of the allohexaploid wheat exome

(2012) Mark O. Winfield et al.   PLANT BIOTECHNOLOGY JOURNAL

Bread matters: a national initiative to profile the genetic diversity of Australian wheat

(2012) David Edwards et al.   PLANT BIOTECHNOLOGY JOURNAL

Discovery and development of exome-based, co-dominant single nucleotide polymorphism markers in hexaploid wheat (Triticum aestivumL.)

(2012) Alexandra M. Allen et al.   PLANT BIOTECHNOLOGY JOURNAL

Single nucleotide polymorphism discovery from wheat next-generation sequence data

(2012) Kaitao Lai et al.   PLANT BIOTECHNOLOGY JOURNAL

Genotype-specific SNP map based on whole chromosome 3B sequence information from wheat cultivars Arina and Forno

(2012) Margarita Shatalina et al.   PLANT BIOTECHNOLOGY JOURNAL

Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach

(2012) Jesse A. Poland et al.   PLoS One

Sequence-based marker development in wheat: Advances and applications to breeding

(2011) Etienne Paux et al.   BIOTECHNOLOGY ADVANCES

Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes

(2011) Eduard D Akhunov et al.   BMC GENOMICS

Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)

(2011) Shiaoman Chao et al.   BMC GENOMICS

Annotation-based genome-wide SNP discovery in the large and complex Aegilops tauschii genome using next-generation sequencing without a reference genome sequence

(2011) Frank M You et al.   BMC GENOMICS

Identification, characterization and interpretation of single-nucleotide sequence variation in allopolyploid crop species

(2011) Sukhjiwan Kaur et al.   PLANT BIOTECHNOLOGY JOURNAL

Genetic Diversity and Linkage Disequilibrium in Chinese Bread Wheat (Triticum aestivum L.) Revealed by SSR Markers

(2011) Chenyang Hao et al.   PLoS One

High-throughput SNP discovery and genotyping in durum wheat (Triticum durum Desf.)

(2011) Daniele Trebbi et al.   THEORETICAL AND APPLIED GENETICS

From SNPs to functional polymorphism: The insight into biotechnology applications

(2010) Pei-Yu Liao et al.   BIOCHEMICAL ENGINEERING JOURNAL

Molecular Genetic Markers: Discovery, Applications, Data Storage and Visualisation

(2009) Chris Duran et al.   Current Bioinformatics

A genome-wide analysis of single nucleotide polymorphism diversity in the world's major cereal crops

(2009) Gary L. A. Barker et al.   PLANT BIOTECHNOLOGY JOURNAL

High-throughput single nucleotide polymorphism genotyping in wheat (Triticumspp.)

(2009) Aurélie Bérard et al.   PLANT BIOTECHNOLOGY JOURNAL

Specific features in using SNP markers developed for allopolyploid wheat

(2009) S. A. Kozlova et al.   RUSSIAN JOURNAL OF GENETICS

Analysis of gene-derived SNP marker polymorphism in US wheat (Triticum aestivum L.) cultivars

(2008) Shiaoman Chao et al.   MOLECULAR BREEDING