Discovery and development of exome-based, co-dominant single nucleotide polymorphism markers in hexaploid wheat (Triticum aestivumL.)

Next-generation sequencing applications for wheat crop improvement

(2012) Paul J. Berkman et al.   AMERICAN JOURNAL OF BOTANY

Combining SNP discovery from next-generation sequencing data with bulked segregant analysis (BSA) to fine-map genes in polyploid wheat

(2012) Martin Trick et al.   BMC PLANT BIOLOGY

MapDisto: fast and efficient computation of genetic linkage maps

(2012) Mathias Lorieux   MOLECULAR BREEDING

Targeted re-sequencing of the allohexaploid wheat exome

(2012) Mark O. Winfield et al.   PLANT BIOTECHNOLOGY JOURNAL

A High-Density Simple Sequence Repeat and Single Nucleotide Polymorphism Genetic Map of the Tetraploid Cotton Genome

(2012) John Z. Yu et al.   G3-Genes Genomes Genetics

Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes

(2011) Eduard D Akhunov et al.   BMC GENOMICS

Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)

(2011) Shiaoman Chao et al.   BMC GENOMICS

Identification, characterization and interpretation of single-nucleotide sequence variation in allopolyploid crop species

(2011) Sukhjiwan Kaur et al.   PLANT BIOTECHNOLOGY JOURNAL

Transcript-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.)

(2011) Alexandra M. Allen et al.   PLANT BIOTECHNOLOGY JOURNAL

Exome sequencing: the expert view

(2011) Leslie G Biesecker et al.   GENOME BIOLOGY

Homoeolog-specific transcriptional bias in allopolyploid wheat

(2010) Alina R Akhunova et al.   BMC GENOMICS

Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor

(2010) R. A. Swanson-Wagner et al.   GENOME RESEARCH

Insertion site-based polymorphism markers open new perspectives for genome saturation and marker-assisted selection in wheat

(2010) Etienne Paux et al.   PLANT BIOTECHNOLOGY JOURNAL

The Composition and Origins of Genomic Variation among Individuals of the Soybean Reference Cultivar Williams 82

(2010) W. J. Haun et al.   PLANT PHYSIOLOGY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Raising yield potential in wheat

(2009) Matthew Reynolds et al.   JOURNAL OF EXPERIMENTAL BOTANY

Rapid genomic changes in polyploid wheat and related species: implications for genome evolution and genetic improvement

(2009) Bao Liu et al.   Journal of Genetics and Genomics

Single nucleotide polymorphism (SNP) discovery in the polyploidBrassica napususing Solexa transcriptome sequencing

(2009) Martin Trick et al.   PLANT BIOTECHNOLOGY JOURNAL

Analysis of gene-derived SNP marker polymorphism in US wheat (Triticum aestivum L.) cultivars

(2008) Shiaoman Chao et al.   MOLECULAR BREEDING