Transcriptome profiling of anthocyanin-related genes reveals effects of light intensity on anthocyanin biosynthesis in red leaf lettuce

Transcriptome analysis and anthocyanin-related genes in red leaf lettuce

(2016) Y.Z. Zhang et al.   GENETICS AND MOLECULAR RESEARCH

Novel insight into the mechanism underlying light-controlled anthocyanin accumulation in eggplant ( Solanum melongena L.)

(2016) Mingmin Jiang et al.   PLANT SCIENCE

Light affects anthocyanin biosynthesis via transcriptional regulation of COP1 in the ever-red leaves of crabapple M.cv. ‘Royalty’

(2016) Yanfen Lu et al.   Brazilian Journal of Botany

Transcriptome Profiling of Light-Regulated Anthocyanin Biosynthesis in the Pericarp of Litchi

(2016) Hong-Na Zhang et al.   Frontiers in Plant Science

Transcriptomic analyses reveal species-specific light-induced anthocyanin biosynthesis in chrysanthemum

(2015) Yan Hong et al.   BMC GENOMICS

A novel R2R3-MYB transcription factor regulates light-mediated floral and vegetative anthocyanin pigmentation patterns in Lilium regale

(2015) Masumi Yamagishi   MOLECULAR BREEDING

Improved peach peel color development by fruit bagging. Enhanced expression of anthocyanin biosynthetic and regulatory genes using white non-woven polypropylene as replacement for yellow paper

(2015) Tao Liu et al.   SCIENTIA HORTICULTURAE

Transcriptional control of flavonoid biosynthesis by MYB–bHLH–WDR complexes

(2015) Wenjia Xu et al.   TRENDS IN PLANT SCIENCE

Transcriptome sequencing of purple petal spot region in tree peony reveals differentially expressed anthocyanin structural genes

(2015) Yanzhao Zhang et al.   Frontiers in Plant Science

Selection of candidate reference genes for real-time PCR studies in lettuce under abiotic stresses

(2014) Joyce Moura Borowski et al.   PLANTA

LcMYB1 Is a Key Determinant of Differential Anthocyanin Accumulation among Genotypes, Tissues, Developmental Phases and ABA and Light Stimuli in Litchi chinensis

(2014) Biao Lai et al.   PLoS One

Light intensity and photoperiod influence the growth and development of hydroponically grown leaf lettuce in a closed-type plant factory system

(2014) Jeong Hwa Kang et al.   Horticulture Environment and Biotechnology

Light-controlled flavonoid biosynthesis in fruits

(2014) Laura Zoratti et al.   Frontiers in Plant Science

EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments

(2013) Ning Leng et al.   BIOINFORMATICS

HY5 regulates anthocyanin biosynthesis by inducing the transcriptional activation of the MYB75/PAP1 transcription factor inArabidopsis

(2013) Dong Ho Shin et al.   FEBS LETTERS

Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions

(2013) Jaina Mistry et al.   NUCLEIC ACIDS RESEARCH

Light and the E3 ubiquitin ligase COP1/SPA control the protein stability of the MYB transcription factors PAP1 and PAP2 involved in anthocyanin accumulation in Arabidopsis

(2013) Alexander Maier et al.   PLANT JOURNAL

Phenylpropanoid metabolites and expression of key genes involved in anthocyanin biosynthesis in the shaded peel of apple fruit in response to sun exposure

(2013) Fengjuan Feng et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Sugar-hormone cross-talk in anthocyanin biosynthesis

(2012) Prasanta Kumar Das et al.   MOLECULES AND CELLS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Screening of UV-B-induced genes from apple peels by SSH: possible involvement of MdCOP1-mediated signaling cascade genes in anthocyanin accumulation

(2012) Ting Peng et al.   PHYSIOLOGIA PLANTARUM

MdCOP1 Ubiquitin E3 Ligases Interact with MdMYB1 to Regulate Light-Induced Anthocyanin Biosynthesis and Red Fruit Coloration in Apple

(2012) Y.-Y. Li et al.   PLANT PHYSIOLOGY

Flavonoid biosynthesis-related genes in grape skin are differentially regulated by temperature and light conditions

(2012) Akifumi Azuma et al.   PLANTA

The photomorphogenic repressors COP1 and DET1: 20 years later

(2012) On Sun Lau et al.   TRENDS IN PLANT SCIENCE

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Arabidopsis TT19 Functions as a Carrier to Transport Anthocyanin from the Cytosol to Tonoplasts

(2011) Yi Sun et al.   Molecular Plant

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

The Purple Cauliflower Arises from Activation of a MYB Transcription Factor

(2010) L.-W. Chiu et al.   PLANT PHYSIOLOGY

Coordinated regulation of anthocyanin biosynthesis in Chinese bayberry (Myrica rubra) fruit by a R2R3 MYB transcription factor

(2010) Shan-Shan Niu et al.   PLANTA

Anthocyanin biosynthesis in pears is regulated by a R2R3-MYB transcription factor PyMYB10

(2010) Shouqian Feng et al.   PLANTA

Grapevine MATE-Type Proteins Act as Vacuolar H+-Dependent Acylated Anthocyanin Transporters

(2009) C. Gomez et al.   PLANT PHYSIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

A Rapid and effective method for RNA extraction from different tissues of grapevine and other woody plants

(2008) Giorgio Gambino et al.   PHYTOCHEMICAL ANALYSIS

Regulation of the anthocyanin biosynthetic pathway by the TTG1/bHLH/Myb transcriptional complex in Arabidopsis seedlings

(2008) Antonio Gonzalez et al.   PLANT JOURNAL