标题
The paradox of HBV evolution as revealed from a 16th century mummy
作者
关键词
Sequence analysis, Paleogenetics, Hepatitis B virus, Viral evolution, Phylogenetic analysis, DNA sequence analysis, Radioactive carbon dating, Mitochondrial DNA
出版物
PLoS Pathogens
Volume 14, Issue 1, Pages e1006750
出版商
Public Library of Science (PLoS)
发表日期
2018-01-05
DOI
10.1371/journal.ppat.1006750
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Ancient Egyptian mummy genomes suggest an increase of Sub-Saharan African ancestry in post-Roman periods
- (2017) Verena J. Schuenemann et al. Nature Communications
- Adaptive evolution of proteins in hepatitis B virus during divergence of genotypes
- (2017) Shengdi Li et al. Scientific Reports
- Comparative analysis estimates the relative frequencies of co-divergence and cross-species transmission within viral families
- (2017) Jemma L. Geoghegan et al. PLoS Pathogens
- 17 th Century Variola Virus Reveals the Recent History of Smallpox
- (2016) Ana T. Duggan et al. CURRENT BIOLOGY
- Inferences from tip-calibrated phylogenies: a review and a practical guide
- (2016) Adrien Rieux et al. MOLECULAR ECOLOGY
- Hepatitis B virus X protein identifies the Smc5/6 complex as a host restriction factor
- (2016) Adrien Decorsière et al. NATURE
- HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing
- (2016) Hansi Weissensteiner et al. NUCLEIC ACIDS RESEARCH
- Ancient mitochondrial DNA provides high-resolution time scale of the peopling of the Americas
- (2016) B. Llamas et al. Science Advances
- Dating the origin of hepatitis B virus reveals higher substitution rate and adaptation on the branch leading to F/H genotypes
- (2015) Dimitrios Paraskevis et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Measurably evolving pathogens in the genomic era
- (2015) Roman Biek et al. TRENDS IN ECOLOGY & EVOLUTION
- Molecular biology of hepatitis B virus infection
- (2015) Christoph Seeger et al. VIROLOGY
- Genotypes and Genetic Variability of Hepatitis B Virus
- (2014) Anna Kramvis INTERVIROLOGY
- leeHom: adaptor trimming and merging for Illumina sequencing reads
- (2014) Gabriel Renaud et al. NUCLEIC ACIDS RESEARCH
- Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal
- (2014) Pontus Skoglund et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Analyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimates
- (2014) S. Duchene et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments
- (2013) J. Dabney et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Possible origins and evolution of the hepatitis B virus (HBV)
- (2013) Stephen Locarnini et al. SEMINARS IN CANCER BIOLOGY
- Ancient DNA Damage
- (2013) J. Dabney et al. Cold Spring Harbor Perspectives in Biology
- Tracing hepatitis B virus to the 16th century in a Korean mummy
- (2012) Gila Kahila Bar-Gal et al. HEPATOLOGY
- Dating the origin and dispersal of hepatitis B virus infection in humans and primates
- (2012) Dimitrios Paraskevis et al. HEPATOLOGY
- Bayesian Phylogenetics with BEAUti and the BEAST 1.7
- (2012) Alexei J. Drummond et al. MOLECULAR BIOLOGY AND EVOLUTION
- Variola Virus in a 300-Year-Old Siberian Mummy
- (2012) Philippe Biagini et al. NEW ENGLAND JOURNAL OF MEDICINE
- Reconstruction of the 1918 Influenza Virus: Unexpected Rewards from the Past
- (2012) J. K. Taubenberger et al. mBio
- Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform
- (2011) Martin Kircher et al. NUCLEIC ACIDS RESEARCH
- Bayesian Estimation of Substitution Rates from Ancient DNA Sequences with Low Information Content
- (2011) Simon Y. W. Ho et al. SYSTEMATIC BIOLOGY
- The Evolutionary Genetics of Emerging Viruses
- (2010) Edward C. Holmes Annual Review of Ecology Evolution and Systematics
- A Bayesian Phylogenetic Method to Estimate Unknown Sequence Ages
- (2010) B. Shapiro et al. MOLECULAR BIOLOGY AND EVOLUTION
- Target-enrichment strategies for next-generation sequencing
- (2010) Lira Mamanova et al. NATURE METHODS
- The Peopling of Europe from the Mitochondrial Haplogroup U5 Perspective
- (2010) Boris Malyarchuk et al. PLoS One
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- A Genetic Variant of Hepatitis B Virus Divergent from Known Human and Ape Genotypes Isolated from a Japanese Patient and Provisionally Assigned to New Genotype J
- (2009) K. Tatematsu et al. JOURNAL OF VIROLOGY
- Sequencing technologies — the next generation
- (2009) Michael L. Metzker NATURE REVIEWS GENETICS
- Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation
- (2008) Mannis van Oven et al. HUMAN MUTATION
- New Complex Recombinant Genotype of Hepatitis B Virus Identified in Vietnam
- (2008) T. T. T. Huy et al. JOURNAL OF VIROLOGY
- Hantavirus Evolution in Relation to Its Rodent and Insectivore Hosts: No Evidence for Codivergence
- (2008) C. Ramsden et al. MOLECULAR BIOLOGY AND EVOLUTION
- Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960
- (2008) Michael Worobey et al. NATURE
- Rates of evolutionary change in viruses: patterns and determinants
- (2008) Siobain Duffy et al. NATURE REVIEWS GENETICS
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