标题
Design of synthetic bacterial communities for predictable plant phenotypes
作者
关键词
Phosphates, Metabolites, Bacteria, Gene expression, Seedlings, Arabidopsis thaliana, Gene ontologies, Root growth
出版物
PLOS BIOLOGY
Volume 16, Issue 2, Pages e2003962
出版商
Public Library of Science (PLoS)
发表日期
2018-02-21
DOI
10.1371/journal.pbio.2003962
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Root microbiota drive direct integration of phosphate stress and immunity
- (2017) Gabriel Castrillo et al. NATURE
- Improving phosphorus use efficiency: a complex trait with emerging opportunities
- (2017) Sigrid Heuer et al. PLANT JOURNAL
- The highly buffered Arabidopsis immune signaling network conceals the functions of its components
- (2017) Rachel A. Hillmer et al. PLoS Genetics
- Root Endophyte Colletotrichum tofieldiae Confers Plant Fitness Benefits that Are Phosphate Status Dependent
- (2016) Kei Hiruma et al. CELL
- Evaluation of different approaches to describe the sorption and desorption of phosphorus in soils on experimental data
- (2016) Caroline van der Salm et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Combinatorial interaction network of transcriptomic and phenotypic responses to nitrogen and hormones in the Arabidopsis thaliana root
- (2016) D. Ristova et al. Science Signaling
- From the Lab to the Farm: An Industrial Perspective of Plant Beneficial Microorganisms
- (2016) J. Jacob Parnell et al. Frontiers in Plant Science
- Combinatorial interaction network of transcriptomic and phenotypic responses to nitrogen and hormones in the Arabidopsis thaliana root
- (2016) D. Ristova et al. Science Signaling
- Individual Members of the Microbiota Disproportionately Modulate Host Innate Immune Responses
- (2015) Annah S. Rolig et al. Cell Host & Microbe
- Microbiota and Host Nutrition across Plant and Animal Kingdoms
- (2015) Stéphane Hacquard et al. Cell Host & Microbe
- Non-targeted profiling of semi-polar metabolites in Arabidopsis root exudates uncovers a role for coumarin secretion and lignification during the local response to phosphate limitation
- (2015) Jörg Ziegler et al. JOURNAL OF EXPERIMENTAL BOTANY
- Differentiating phosphate-dependent and phosphate-independent systemic phosphate-starvation response networks in Arabidopsis thaliana through the application of phosphite
- (2015) Ricarda Jost et al. JOURNAL OF EXPERIMENTAL BOTANY
- The EXS Domain of PHO1 Participates in the Response of Shoots to Phosphate Deficiency via a Root-to-Shoot Signal
- (2015) Stefanie Wege et al. PLANT PHYSIOLOGY
- Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
- (2015) S. L. Lebeis et al. SCIENCE
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- MT-Toolbox: improved amplicon sequencing using molecule tags
- (2014) Scott M Yourstone et al. BMC BIOINFORMATICS
- Identifying Gut Microbe-Host Phenotype Relationships Using Combinatorial Communities in Gnotobiotic Mice
- (2014) J. J. Faith et al. Science Translational Medicine
- Structure and Functions of the Bacterial Microbiota of Plants
- (2013) Davide Bulgarelli et al. Annual Review of Plant Biology
- UPARSE: highly accurate OTU sequences from microbial amplicon reads
- (2013) Robert C Edgar NATURE METHODS
- Practical innovations for high-throughput amplicon sequencing
- (2013) Derek S Lundberg et al. NATURE METHODS
- PlantGSEA: a gene set enrichment analysis toolkit for plant community
- (2013) Xin Yi et al. NUCLEIC ACIDS RESEARCH
- Identification of Downstream Components of Ubiquitin-Conjugating Enzyme PHOSPHATE2 by Quantitative Membrane Proteomics in Arabidopsis Roots
- (2013) T.-K. Huang et al. PLANT CELL
- Design and characterization of synthetic fungal-bacterial consortia for direct production of isobutanol from cellulosic biomass
- (2013) Jeremy J. Minty et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Defining the core Arabidopsis thaliana root microbiome
- (2012) Derek S. Lundberg et al. NATURE
- Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
- (2012) Davide Bulgarelli et al. NATURE
- Root Nodulation: A Paradigm for How Plant-Microbe Symbiosis Influences Host Developmental Pathways
- (2011) Guilhem J. Desbrosses et al. Cell Host & Microbe
- Soil Microorganisms Mediating Phosphorus Availability Update on Microbial Phosphorus
- (2011) A. E. Richardson et al. PLANT PHYSIOLOGY
- phytools: an R package for phylogenetic comparative biology (and other things)
- (2011) Liam J. Revell Methods in Ecology and Evolution
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Uncoupling phosphate deficiency from its major effects on growth and transcriptome via PHO1 expression in Arabidopsis
- (2010) Hatem Rouached et al. PLANT JOURNAL
- Plasma Metabolomic Profiles Reflective of Glucose Homeostasis in Non-Diabetic and Type 2 Diabetic Obese African-American Women
- (2010) Oliver Fiehn et al. PLoS One
- Shifts in bacterial community structure associated with inputs of low molecular weight carbon compounds to soil
- (2010) Kathryn G. Eilers et al. SOIL BIOLOGY & BIOCHEMISTRY
- A Central Regulatory System Largely Controls Transcriptional Activation and Repression Responses to Phosphate Starvation in Arabidopsis
- (2010) Regla Bustos et al. PLoS Genetics
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
- (2009) M. N. Price et al. MOLECULAR BIOLOGY AND EVOLUTION
- Quality control for plant metabolomics: reporting MSI-compliant studies
- (2008) Oliver Fiehn et al. PLANT JOURNAL
- The Microbial Engines That Drive Earth's Biogeochemical Cycles
- (2008) P. G. Falkowski et al. SCIENCE
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now