METTL3-mediated m6A modification is required for cerebellar development

Phasing Gene Expression: mRNA N6-Methyladenosine Regulates Temporal Progression of Mammalian Cortical Neurogenesis

(2018) Hailing Shi et al.   BIOCHEMISTRY

Decoding hidden messages in neurons: insights from epitranscriptome-controlled and specialized ribosome-controlled translation

(2018) Yi-Shuian Huang et al.   CURRENT OPINION IN NEUROBIOLOGY

Epitranscriptomic m 6 A Regulation of Axon Regeneration in the Adult Mammalian Nervous System

(2018) Yi-Lan Weng et al.   NEURON

Fat mass and obesity-associated (FTO) protein regulates adult neurogenesis

(2017) Liping Li et al.   HUMAN MOLECULAR GENETICS

m6A-dependent maternal mRNA clearance facilitates zebrafish maternal-to-zygotic transition

(2017) Boxuan Simen Zhao et al.   NATURE

The emerging field of epigenetics in neurodegeneration and neuroprotection

(2017) Jee-Yeon Hwang et al.   NATURE REVIEWS NEUROSCIENCE

Dynamic m6A modification regulates local translation of mRNA in axons

(2017) Jun Yu et al.   NUCLEIC ACIDS RESEARCH

Neuronal survival in the brain: neuron type-specific mechanisms

(2017) Ulrich Pfisterer et al.   Cell Death & Disease

Ten-eleven translocation 2 interacts with forkhead box O3 and regulates adult neurogenesis

(2017) Xuekun Li et al.   Nature Communications

Region-specific RNA m 6 A methylation represents a new layer of control in the gene regulatory network in the mouse brain

(2017) Mengqi Chang et al.   Open Biology

Complete Meiosis from Embryonic Stem Cell-Derived Germ Cells In Vitro

(2016) Quan Zhou et al.   Cell Stem Cell

The Role of Epigenetic Mechanisms in the Regulation of Gene Expression in the Nervous System

(2016) Justyna Cholewa-Waclaw et al.   JOURNAL OF NEUROSCIENCE

Experience-Dependent Accumulation of N 6 -Methyladenosine in the Prefrontal Cortex Is Associated with Memory Processes in Mice

(2016) Jocelyn Widagdo et al.   JOURNAL OF NEUROSCIENCE

Nuclear m 6 A Reader YTHDC1 Regulates mRNA Splicing

(2016) Wen Xiao et al.   MOLECULAR CELL

The m 6 A Methyltransferase METTL3 Promotes Translation in Human Cancer Cells

(2016) Shuibin Lin et al.   MOLECULAR CELL

The Role of MicroRNAs in Cerebellar Development and Autism Spectrum Disorder During Embryogenesis

(2016) Lena Constantin   MOLECULAR NEUROBIOLOGY

m6A modulates neuronal functions and sex determination in Drosophila

(2016) Tina Lence et al.   NATURE

TACO produces robust multisample transcriptome assemblies from RNA-seq

(2016) Yashar S Niknafs et al.   NATURE METHODS

Epigenetic mechanisms in neurogenesis

(2016) Bing Yao et al.   NATURE REVIEWS NEUROSCIENCE

Role of Tet1/3 Genes and Chromatin Remodeling Genes in Cerebellar Circuit Formation

(2016) Xiaodong Zhu et al.   NEURON

Genetics and Epigenetics in Adult Neurogenesis

(2016) Jenny Hsieh et al.   Cold Spring Harbor Perspectives in Biology

5′ UTR m6A Promotes Cap-Independent Translation

(2015) Kate D. Meyer et al.   CELL

N6-methyladenosine Modulates Messenger RNA Translation Efficiency

(2015) Xiao Wang et al.   CELL

Meta- and Orthogonal Integration of Influenza “OMICs” Data Defines a Role for UBR4 in Virus Budding

(2015) Shashank Tripathi et al.   Cell Host & Microbe

m6A RNA Methylation Is Regulated by MicroRNAs and Promotes Reprogramming to Pluripotency

(2015) Tong Chen et al.   Cell Stem Cell

Delineating the Factors and Cellular Mechanisms Involved in the Survival of Cerebellar Granule Neurons

(2015) Xavier Xifró et al.   CEREBELLUM

Consensus Paper: Cerebellar Development

(2015) Ketty Leto et al.   CEREBELLUM

Dynamic m6A mRNA methylation directs translational control of heat shock response

(2015) Jun Zhou et al.   NATURE

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation

(2015) Shay Geula et al.   SCIENCE

Cellular commitment in the developing cerebellum

(2015) Hassan Marzban et al.   Frontiers in Cellular Neuroscience

Cell Division Mode Change Mediates the Regulation of Cerebellar Granule Neurogenesis Controlled by the Sonic Hedgehog Signaling

(2015) Rong Yang et al.   Stem Cell Reports

RNA-Seq Analysis of Differential Splice Junction Usage and Intron Retentions by DEXSeq

(2015) Yafang Li et al.   PLoS One

PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data

(2014) Yanxiao Zhang et al.   BIOINFORMATICS

HDAC signaling in neuronal development and axon regeneration

(2014) Yongcheol Cho et al.   CURRENT OPINION IN NEUROBIOLOGY

Development of the cerebellum: simple steps to make a 'little brain'

(2014) T. Butts et al.   DEVELOPMENT

Unlocking epigenetic codes in neurogenesis

(2014) B. Yao et al.   GENES & DEVELOPMENT

Gene expression regulation mediated through reversible m6A RNA methylation

(2014) Ye Fu et al.   NATURE REVIEWS GENETICS

The Expression of HDAC1 and HDAC2 During Cerebellar Cortical Development

(2013) Ji Young Janice Yoo et al.   CEREBELLUM

N6-methyladenosine-dependent regulation of messenger RNA stability

(2013) Xiao Wang et al.   NATURE

Simultaneous generation and germline transmission of multiple gene mutations in rat using CRISPR-Cas systems

(2013) Wei Li et al.   NATURE BIOTECHNOLOGY

A METTL3–METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation

(2013) Jianzhao Liu et al.   Nature Chemical Biology

The fat mass and obesity associated gene (Fto) regulates activity of the dopaminergic midbrain circuitry

(2013) Martin E Hess et al.   NATURE NEUROSCIENCE

Transcriptome-wide mapping of N6-methyladenosine by m6A-seq based on immunocapturing and massively parallel sequencing

(2013) Dan Dominissini et al.   Nature Protocols

Long noncoding RNAs in development and disease of the central nervous system

(2013) Shi-Yan Ng et al.   TRENDS IN GENETICS

Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3′ UTRs and near Stop Codons

(2012) Kate D. Meyer et al.   CELL

Pten Deletion in Adult Hippocampal Neural Stem/Progenitor Cells Causes Cellular Abnormalities and Alters Neurogenesis

(2012) A. Amiri et al.   JOURNAL OF NEUROSCIENCE

Epigenetic control on cell fate choice in neural stem cells

(2012) Xiao-Ling Hu et al.   Protein & Cell

Epigenetic regulation of neurogenesis in the adult mammalian brain

(2011) Jiaqi Sun et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

Alternative transcription exceeds alternative splicing in generating the transcriptome diversity of cerebellar development

(2011) Sharmistha Pal et al.   GENOME RESEARCH

miRNAs Stem Cell Reprogramming for Neuronal Induction and Differentiation

(2011) Claire Perruisseau-Carrier et al.   MOLECULAR NEUROBIOLOGY

Alcohol Exposure Decreases CREB Binding Protein Expression and Histone Acetylation in the Developing Cerebellum

(2011) Weixiang Guo et al.   PLoS One

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

DAPK1 Interaction with NMDA Receptor NR2B Subunits Mediates Brain Damage in Stroke

(2010) Weihong Tu et al.   CELL

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

Dysfunction in GABA signalling mediates autism-like stereotypies and Rett syndrome phenotypes

(2010) Hsiao-Tuan Chao et al.   NATURE

Epigenetic choreographers of neurogenesis in the adult mammalian brain

(2010) Dengke K Ma et al.   NATURE NEUROSCIENCE

Roles of small regulatory RNAs in determining neuronal identity

(2010) Xuekun Li et al.   NATURE REVIEWS NEUROSCIENCE

Ezh2, the histone methyltransferase of PRC2, regulates the balance between self-renewal and differentiation in the cerebral cortex

(2010) J. D. Pereira et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dnmt3a-Dependent Nonpromoter DNA Methylation Facilitates Transcription of Neurogenic Genes

(2010) H. Wu et al.   SCIENCE

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS