标题
Metabolomics 20 years on: what have we learned and what hurdles remain?
作者
关键词
-
出版物
PLANT JOURNAL
Volume 94, Issue 6, Pages 933-942
出版商
Wiley
发表日期
2018-05-08
DOI
10.1111/tpj.13950
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Tomato Multiomics Reveals Consequences of Crop Domestication and Improvement
- (2018) James Giovannoni CELL
- Rewiring of the Fruit Metabolome in Tomato Breeding
- (2018) Guangtao Zhu et al. CELL
- A Map of Protein-Metabolite Interactions Reveals Principles of Chemical Communication
- (2018) Ilaria Piazza et al. CELL
- Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions
- (2018) Si Wu et al. Molecular Plant
- An integrated multi-layered analysis of the metabolic networks of different tissues uncovers key genetic components of primary metabolism in maize
- (2018) Weiwei Wen et al. PLANT JOURNAL
- Unraveling lipid metabolism in maize with time-resolved multi-omics data
- (2018) Francisco de Abreu e Lima et al. PLANT JOURNAL
- Metabolite profiling of barley flag leaves under drought and combined heat and drought stress reveals metabolic QTLs for metabolites associated with antioxidant defense
- (2017) Sven Eduard Templer et al. JOURNAL OF EXPERIMENTAL BOTANY
- Identifying metabolites by integrating metabolome databases with mass spectrometry cheminformatics
- (2017) Zijuan Lai et al. NATURE METHODS
- HMDB 4.0: the human metabolome database for 2018
- (2017) David S Wishart et al. NUCLEIC ACIDS RESEARCH
- Canalization of Tomato Fruit Metabolism
- (2017) Saleh Alseekh et al. PLANT CELL
- An InDel in the Promoter of Al-ACTIVATED MALATE TRANSPORTER9 Selected during Tomato Domestication Determines Fruit Malate Contents and Aluminum Tolerance
- (2017) Jie Ye et al. PLANT CELL
- High spatial resolution mass spectrometry imaging reveals the genetically programmed, developmental modification of the distribution of thylakoid membrane lipids among individual cells of maize leaf
- (2017) Maria Emilia Dueñas et al. PLANT JOURNAL
- Integrated omics analysis of specialized metabolism in medicinal plants
- (2017) Amit Rai et al. PLANT JOURNAL
- Engineering central metabolism - a grand challenge for plant biologists
- (2017) Lee J. Sweetlove et al. PLANT JOURNAL
- A chemical genetic roadmap to improved tomato flavor
- (2017) Denise Tieman et al. SCIENCE
- Differentially evolved glucosyltransferases determine natural variation of rice flavone accumulation and UV-tolerance
- (2017) Meng Peng et al. Nature Communications
- An evolutionarily young defense metabolite influences the root growth of plants via the ancient TOR signaling pathway
- (2017) Frederikke Gro Malinovsky et al. eLife
- A Quantitative Profiling Method of Phytohormones and Other Metabolites Applied to Barley Roots Subjected to Salinity Stress
- (2017) Da Cao et al. Frontiers in Plant Science
- From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics
- (2017) Leonardo Perez de Souza et al. GigaScience
- System-wide detection of protein-small molecule complexes suggests extensive metabolite regulation in plants
- (2017) Daniel Veyel et al. Scientific Reports
- Metabolite pools and carbon flow during C4photosynthesis in maize:13CO2labeling kinetics and cell type fractionation
- (2016) Stéphanie Arrivault et al. JOURNAL OF EXPERIMENTAL BOTANY
- Evolutionary Metabolomics Reveals Domestication-Associated Changes in Tetraploid Wheat Kernels
- (2016) Romina Beleggia et al. MOLECULAR BIOLOGY AND EVOLUTION
- Solanum pennelliibackcross inbred lines (BILs) link small genomic bins with tomato traits
- (2016) Itai Ofner et al. PLANT JOURNAL
- A Tale of Two Sugars: Trehalose 6-Phosphate and Sucrose
- (2016) Carlos M. Figueroa et al. PLANT PHYSIOLOGY
- Network-Guided GWAS Improves Identification of Genes Affecting Free Amino Acids
- (2016) Ruthie Angelovici et al. PLANT PHYSIOLOGY
- Broadening Our Portfolio in the Genetic Improvement of Maize Chemical Composition
- (2016) Weiwei Wen et al. TRENDS IN GENETICS
- Omic Relief for the Biotically Stressed: Metabolomics of Plant Biotic Interactions
- (2016) Hezi Tenenboim et al. TRENDS IN PLANT SCIENCE
- More than Pictures: When MS Imaging Meets Histology
- (2016) Yonghui Dong et al. TRENDS IN PLANT SCIENCE
- The WEIZMASS spectral library for high-confidence metabolite identification
- (2016) Nir Shahaf et al. Nature Communications
- Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae
- (2016) Takayuki Tohge et al. Nature Communications
- Combined Use of Genome-Wide Association Data and Correlation Networks Unravels Key Regulators of Primary Metabolism in Arabidopsis thaliana
- (2016) Si Wu et al. PLoS Genetics
- Sample Preparation for Mass Spectrometry Imaging of Plant Tissues: A Review
- (2016) Yonghui Dong et al. Frontiers in Plant Science
- What the transcriptome does not tell — proteomics and metabolomics are closer to the plants’ patho-phenotype
- (2015) Ivo Feussner et al. CURRENT OPINION IN PLANT BIOLOGY
- Metabolomics continues to expand: highlights from the 2015 metabolomics conference
- (2015) Oliver Fiehn et al. Metabolomics
- Modern plant metabolomics: advanced natural product gene discoveries, improved technologies, and future prospects
- (2015) Lloyd W. Sumner et al. NATURAL PRODUCT REPORTS
- ECMDB 2.0: A richer resource for understanding the biochemistry ofE. coli
- (2015) Tanvir Sajed et al. NUCLEIC ACIDS RESEARCH
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- (2015) Saleh Alseekh et al. PLANT CELL
- Quantitative Variation in Responses to Root Spatial Constraint withinArabidopsis thaliana
- (2015) Bindu Joseph et al. PLANT CELL
- In vitro reconstruction and analysis of evolutionary variation of the tomato acylsucrose metabolic network
- (2015) Pengxiang Fan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genetic Variation in the Nuclear and Organellar Genomes Modulates Stochastic Variation in the Metabolome, Growth, and Defense
- (2015) Bindu Joseph et al. PLoS Genetics
- Profiling of Stable Isotope Enrichment in Specialized Metabolites Using Liquid Chromatography and Multiplexed Nonselective Collision-Induced Dissociation
- (2014) Zhenzhen Wang et al. ANALYTICAL CHEMISTRY
- On the regulation and function of secondary metabolism during fruit development and ripening
- (2014) Takayuki Tohge et al. JOURNAL OF EXPERIMENTAL BOTANY
- Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean
- (2014) E. Bellucci et al. PLANT CELL
- Metabolome-genome-wide association study dissects genetic architecture for generating natural variation in rice secondary metabolism
- (2014) Fumio Matsuda et al. PLANT JOURNAL
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- (2014) Emmanuel Gaquerel et al. PLANT JOURNAL
- Genome-Wide Association in Tomato Reveals 44 Candidate Loci for Fruit Metabolic Traits
- (2014) C. Sauvage et al. PLANT PHYSIOLOGY
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- (2014) Tomas Cajka et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Metabolome-based genome-wide association study of maize kernel leads to novel biochemical insights
- (2014) Weiwei Wen et al. Nature Communications
- Natural occurring epialleles determine vitamin E accumulation in tomato fruits
- (2014) Leandro Quadrana et al. Nature Communications
- The Spatial Organization of Metabolism Within the Plant Cell
- (2013) Lee J. Sweetlove et al. Annual Review of Plant Biology
- Making new molecules—evolution of structures for novel metabolites in plants
- (2013) Daniel J Kliebenstein CURRENT OPINION IN PLANT BIOLOGY
- New Synthesis—Regulatory Evolution, the Veiled World of Chemical Diversification
- (2013) Daniel J. Kliebenstein JOURNAL OF CHEMICAL ECOLOGY
- LipidBlast in silico tandem mass spectrometry database for lipid identification
- (2013) Tobias Kind et al. NATURE METHODS
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- (2013) Ryo Nakabayashi et al. PLANT JOURNAL
- Whole-Genome Mapping of Agronomic and Metabolic Traits to Identify Novel Quantitative Trait Loci in Bread Wheat Grown in a Water-Limited Environment
- (2013) C. B. Hill et al. PLANT PHYSIOLOGY
- PLGG1, a plastidic glycolate glycerate transporter, is required for photorespiration and defines a unique class of metabolite transporters
- (2013) T. R. Pick et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- AtABCG29 Is a Monolignol Transporter Involved in Lignin Biosynthesis
- (2012) Santiago Alejandro et al. CURRENT BIOLOGY
- An alternative route to cyclic terpenes by reductive cyclization in iridoid biosynthesis
- (2012) Fernando Geu-Flores et al. NATURE
- ECMDB: The E. coli Metabolome Database
- (2012) An Chi Guo et al. NUCLEIC ACIDS RESEARCH
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- (2012) Fumio Matsuda et al. PLANT JOURNAL
- Untargeted Metabolic Quantitative Trait Loci Analyses Reveal a Relationship between Primary Metabolism and Potato Tuber Quality
- (2012) N. Carreno-Quintero et al. PLANT PHYSIOLOGY
- The genetic architecture of branched-chain amino acid accumulation in tomato fruits
- (2011) Andrej Kochevenko et al. JOURNAL OF EXPERIMENTAL BOTANY
- Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function
- (2011) Takayuki Tohge et al. Nature Protocols
- KNApSAcK Family Databases: Integrated Metabolite–Plant Species Databases for Multifaceted Plant Research
- (2011) Farit Mochamad Afendi et al. PLANT AND CELL PHYSIOLOGY
- Identification of Genes in the Phenylalanine Metabolic Pathway by Ectopic Expression of a MYB Transcription Factor in Tomato Fruit
- (2011) V. Dal Cin et al. PLANT CELL
- Elemental formula annotation of polar and lipophilic metabolites using13C,15N and34S isotope labelling, in combination with high-resolution mass spectrometry
- (2011) Patrick Giavalisco et al. PLANT JOURNAL
- Metabolomic analysis of Arabidopsis reveals hemiterpenoid glycosides as products of a nitrate ion-regulated, carbon flux overflow
- (2011) J. L. Ward et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Combining Genome-Wide Association Mapping and Transcriptional Networks to Identify Novel Genes Controlling Glucosinolates in Arabidopsis thaliana
- (2011) Eva K. F. Chan et al. PLOS BIOLOGY
- MassBank: a public repository for sharing mass spectral data for life sciences
- (2010) Hisayuki Horai et al. JOURNAL OF MASS SPECTROMETRY
- Network Analysis of Enzyme Activities and Metabolite Levels and Their Relationship to Biomass in a Large Panel of Arabidopsis Accessions
- (2010) R. Sulpice et al. PLANT CELL
- Mass spectrometry screening reveals widespread diversity in trichome specialized metabolites of tomato chromosomal substitution lines
- (2010) Anthony Schilmiller et al. PLANT JOURNAL
- Metabolome and water homeostasis analysis of Thellungiella salsuginea suggests that dehydration tolerance is a key response to osmotic stress in this halophyte
- (2010) Raphaël Lugan et al. PLANT JOURNAL
- The Influence of Fruit Load on the Tomato Pericarp Metabolome in a Solanum chmielewskii Introgression Line Population
- (2010) P. T. Do et al. PLANT PHYSIOLOGY
- Biosynthesis of glucosinolates – gene discovery and beyond
- (2010) Ida E. Sønderby et al. TRENDS IN PLANT SCIENCE
- Dual Labeling of Metabolites for Metabolome Analysis (DLEMMA): A New Approach for the Identification and Relative Quantification of Metabolites by Means of Dual Isotope Labeling and Liquid Chromatography−Mass Spectrometry
- (2009) Liron Feldberg et al. ANALYTICAL CHEMISTRY
- Metabolomics for Functional Genomics, Systems Biology, and Biotechnology
- (2009) Kazuki Saito et al. Annual Review of Plant Biology
- Understanding the Evolution of Defense Metabolites in Arabidopsis thaliana Using Genome-wide Association Mapping
- (2009) E. K. F. Chan et al. GENETICS
- Web-based resources for mass-spectrometry-based metabolomics: A user’s guide
- (2009) Takayuki Tohge et al. PHYTOCHEMISTRY
- Starch as a major integrator in the regulation of plant growth
- (2009) R. Sulpice et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Alkaloid Biosynthesis: Metabolism and Trafficking
- (2008) Jörg Ziegler et al. Annual Review of Plant Biology
- Temporally resolved GC-MS-based metabolic profiling of herbicide treated plants treated reveals that changes in polar primary metabolites alone can distinguish herbicides of differing mode of action
- (2008) Sandra Trenkamp et al. Metabolomics
- 1H NMR metabolite fingerprinting and metabolomic analysis of perchloric acid extracts from plant tissues
- (2008) Nicholas J Kruger et al. Nature Protocols
- Biochemical Networks and Epistasis Shape the Arabidopsis thaliana Metabolome
- (2008) H. C. Rowe et al. PLANT CELL
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