Transcriptome response of human skeletal muscle to divergent exercise stimuli

Prior acetaminophen consumption impacts the early adaptive cellular response of human skeletal muscle to resistance exercise

(2018) Andrew C. D’Lugos et al.   JOURNAL OF APPLIED PHYSIOLOGY

Whole transcriptome profiling of the human hippocampus suggests an involvement of the KIBRA rs17070145 polymorphism in differential activation of the MAPK signaling pathway

(2017) Ignazio S Piras et al.   HIPPOCAMPUS

The impact of postexercise essential amino acid ingestion on the ubiquitin proteasome and autophagosomal-lysosomal systems in skeletal muscle of older men

(2017) Jared M. Dickinson et al.   JOURNAL OF APPLIED PHYSIOLOGY

Aerobic exercise augments muscle transcriptome profile of resistance exercise

(2016) Tommy R. Lundberg et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

Coupling of mitochondrial function and skeletal muscle fiber type by a miR‐499/Fnip1/AMPK circuit

(2016) Jing Liu et al.   EMBO Molecular Medicine

Heat shock proteins and exercise adaptations. Our knowledge thus far and the road still ahead

(2016) Darren C. Henstridge et al.   JOURNAL OF APPLIED PHYSIOLOGY

InterPro in 2017—beyond protein family and domain annotations

(2016) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

The effect of exercise mode on the acute response of satellite cells in old men

(2015) J. P. Nederveen et al.   Acta Physiologica

Understanding the Cellular and Molecular Mechanisms of Physical Activity-Induced Health Benefits

(2015) P. Darrell Neufer et al.   Cell Metabolism

Immediate-early response 5 (IER5) interacts with protein phosphatase 2A and regulates the phosphorylation of ribosomal protein S6 kinase and heat shock factor 1

(2015) Shotaro Kawabata et al.   FEBS LETTERS

TWEAK-Fn14 pathway activation after exercise in human skeletal muscle: insights from two exercise modes and a time course investigation

(2015) Ulrika Raue et al.   JOURNAL OF APPLIED PHYSIOLOGY

PANTHER version 10: expanded protein families and functions, and analysis tools

(2015) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Mechanisms of leiomodin 2-mediated regulation of actin filament in muscle cells

(2015) Xiaorui Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulation of autophagy and the ubiquitin–proteasome system by the FoxO transcriptional network during muscle atrophy

(2015) Giulia Milan et al.   Nature Communications

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Exercise Biology and Medicine: Innovative Research to Improve Global Health

(2014) Marcas M. Bamman et al.   MAYO CLINIC PROCEEDINGS

Deubiquitinases in skeletal muscle atrophy

(2013) Simon S. Wing   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Heightened muscle inflammation susceptibility may impair regenerative capacity in aging humans

(2013) Edward K. Merritt et al.   JOURNAL OF APPLIED PHYSIOLOGY

Nuclear receptor/microRNA circuitry links muscle fiber type to energy metabolism

(2013) Zhenji Gan et al.   JOURNAL OF CLINICAL INVESTIGATION

The Reactome pathway knowledgebase

(2013) David Croft et al.   NUCLEIC ACIDS RESEARCH

Cluster analysis reveals differential transcript profiles associated with resistance training-induced human skeletal muscle hypertrophy

(2013) Anna Thalacker-Mercer et al.   PHYSIOLOGICAL GENOMICS

Loss of the Inducible Hsp70 Delays the Inflammatory Response to Skeletal Muscle Injury and Severely Impairs Muscle Regeneration

(2013) Sarah M. Senf et al.   PLoS One

Molecular Networks of Human Muscle Adaptation to Exercise and Age

(2013) Bethan E. Phillips et al.   PLoS Genetics

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Aging differentially affects human skeletal muscle amino acid transporter expression when essential amino acids are ingested after exercise

(2012) Jared M. Dickinson et al.   CLINICAL NUTRITION

Transcriptome signature of resistance exercise adaptations: mixed muscle and fiber type specific profiles in young and old adults

(2012) Ulrika Raue et al.   JOURNAL OF APPLIED PHYSIOLOGY

Annotating Cancer Variants and Anti-Cancer Therapeutics in Reactome

(2012) Marija Milacic et al.   Cancers

Exercise and PGC-1α-Independent Synchronization of Type I Muscle Metabolism and Vasculature by ERRγ

(2011) Vihang A. Narkar et al.   Cell Metabolism

An RNAi screen identifies USP2 as a factor required for TNF-α-induced NF-κB signaling

(2011) Marie Metzig et al.   INTERNATIONAL JOURNAL OF CANCER

Mammalian Target of Rapamycin Complex 1 Activation Is Required for the Stimulation of Human Skeletal Muscle Protein Synthesis by Essential Amino Acids

(2011) Jared M. Dickinson et al.   JOURNAL OF NUTRITION

MAP kinase phosphatase-1 deficiency impairs skeletal muscle regeneration and exacerbates muscular dystrophy

(2010) Hao Shi et al.   FASEB JOURNAL

IRF2BP2 is a skeletal and cardiac muscle-enriched ischemia-inducible activator of VEGFA expression

(2010) Allen C. T. Teng et al.   FASEB JOURNAL

Estrogen-related Receptor γ Is a Key Regulator of Muscle Mitochondrial Activity and Oxidative Capacity

(2010) Shamina M. Rangwala et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Exercise intensity-dependent regulation of peroxisome proliferator-activated receptor γ coactivator-1α mRNA abundance is associated with differential activation of upstream signalling kinases in human skeletal muscle

(2010) Brendan Egan et al.   JOURNAL OF PHYSIOLOGY-LONDON

Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation

(2010) Daniele Merico et al.   PLoS One

Global Gene Expression in Skeletal Muscle from Well-Trained Strength and Endurance Athletes

(2009) NIGEL K. STEPTO et al.   MEDICINE AND SCIENCE IN SPORTS AND EXERCISE

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Differential genomic responses in old vs. young humans despite similar levels of modest muscle damage after resistance loading

(2009) Anna E. Thalacker-Mercer et al.   PHYSIOLOGICAL GENOMICS

Sequential muscle biopsies during a 6-h tracer infusion do not affect human mixed muscle protein synthesis and muscle phenylalanine kinetics

(2008) Elena Volpi et al.   AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM

Transcriptional Control of Energy Homeostasis by the Estrogen-Related Receptors

(2008) Vincent Giguère   ENDOCRINE REVIEWS

Effects of spaceflight on murine skeletal muscle gene expression

(2008) David L. Allen et al.   JOURNAL OF APPLIED PHYSIOLOGY

Differential effects of resistance and endurance exercise in the fed state on signalling molecule phosphorylation and protein synthesis in human muscle

(2008) Sarah B. Wilkinson et al.   JOURNAL OF PHYSIOLOGY-LONDON

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH