Whole-Genome Comparison Reveals Heterogeneous Divergence and Mutation Hotspots in Chloroplast Genome of Eucommia ulmoides Oliver
出版年份 2018 全文链接
标题
Whole-Genome Comparison Reveals Heterogeneous Divergence and Mutation Hotspots in Chloroplast Genome of Eucommia ulmoides Oliver
作者
关键词
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出版物
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 19, Issue 4, Pages 1037
出版商
MDPI AG
发表日期
2018-03-31
DOI
10.3390/ijms19041037
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- (2017) Janka Puterova et al. Genome Biology and Evolution
- Identification of the Sex-Biased Gene Expression and Putative Sex-Associated Genes in Eucommia ulmoides Oliver Using Comparative Transcriptome Analyses
- (2017) Wencai Wang et al. MOLECULES
- Characterization of the complete chloroplast genome of the relict Chinese false tupelo, Camptotheca acuminata
- (2017) Si-Yun Chen et al. Conservation Genetics Resources
- Comparative and Phylogenetic Analyses of the Complete Chloroplast Genomes of Three Arcto-Tertiary Relicts: Camptotheca acuminata, Davidia involucrata, and Nyssa sinensis
- (2017) Zhenyan Yang et al. Frontiers in Plant Science
- Isolation and characterization of microsatellite markers for Eucommia ulmoides (Eucommiaceae), an endangered tree, using next-generation sequencing
- (2016) W.R. Zhang et al. GENETICS AND MOLECULAR RESEARCH
- Complete chloroplast genome sequences of Eucommia ulmoides: genome structure and evolution
- (2016) Lin Wang et al. Tree Genetics & Genomes
- Tree of life for the genera of Chinese vascular plants
- (2016) Zhi-Duan Chen et al. Journal of Systematics and Evolution
- Characterization of the complete chloroplast genome of Camptotheca acuminata
- (2016) Weiwei Wang et al. Conservation Genetics Resources
- Conservation and sustainable use of medicinal plants: problems, progress, and prospects
- (2016) Shi-Lin Chen et al. Chinese Medicine
- Genome-Wide Identification of MicroRNAs and Their Targets in the Leaves and Fruits of Eucommia ulmoides Using High-Throughput Sequencing
- (2016) Lin Wang et al. Frontiers in Plant Science
- The Complete Chloroplast Genome Sequences of Five Epimedium Species: Lights into Phylogenetic and Taxonomic Analyses
- (2016) Yanjun Zhang et al. Frontiers in Plant Science
- Chloroplast Genome Evolution in Actinidiaceae: clpP Loss, Heterogenous Divergence and Phylogenomic Practice
- (2016) Wen-Cai Wang et al. PLoS One
- Astonishing 35S rDNA diversity in the gymnosperm species Cycas revoluta Thunb
- (2015) Wencai Wang et al. CHROMOSOMA
- Genome size diversity in angiosperms and its influence on gene space
- (2015) Steven Dodsworth et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Genetic diversity and population structure of Eucommia ulmoides Oliver, an endangered medicinal plant in China
- (2015) J. Yu et al. GENETICS AND MOLECULAR RESEARCH
- A Comparative Analysis of Whole Plastid Genomes from the Apiales: Expansion and Contraction of the Inverted Repeat, Mitochondrial to Plastid Transfer of DNA, and Identification of Highly Divergent Noncoding Regions
- (2015) Stephen R. Downie et al. SYSTEMATIC BOTANY
- Nuclear genetic variation across the range of ponderosa pine (Pinus ponderosa): Phylogeographic, taxonomic and conservation implications
- (2015) Kevin M. Potter et al. Tree Genetics & Genomes
- Developing genome-wide microsatellite markers of bamboo and their applications on molecular marker assisted taxonomy for accessions in the genus Phyllostachys
- (2015) Hansheng Zhao et al. Scientific Reports
- Mimosoid legume plastome evolution: IR expansion, tandem repeat expansions, and accelerated rate of evolution in clpP
- (2015) Diana V. Dugas et al. Scientific Reports
- Development of Chloroplast Microsatellite Markers and Analysis of Chloroplast Diversity in Chinese Jujube (Ziziphus jujuba Mill.) and Wild Jujube (Ziziphus acidojujuba Mill.)
- (2015) Jian Huang et al. PLoS One
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Plastid phylogenomics and green plant phylogeny: almost full circle but not quite there
- (2014) Charles C Davis et al. BMC BIOLOGY
- Conflict in outcomes for conservation based on population genetic diversity and genetic divergence approaches: a case study in the Japanese relictual conifer Sciadopitys verticillata (Sciadopityaceae)
- (2014) James R. P. Worth et al. CONSERVATION GENETICS
- A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits
- (2014) Yu Li et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- The first genetic linkage map of Eucommia ulmoides
- (2014) DAWEI WANG et al. JOURNAL OF GENETICS
- Genetic Diversity and Population Structure of the Major Peanut (Arachis hypogaea L.) Cultivars Grown in China by SSR Markers
- (2014) Xiaoping Ren et al. PLoS One
- Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times
- (2014) Liping Zeng et al. Nature Communications
- Microsatellite genetic variation in the Chinese endemicEucommia ulmoides(Eucommiaceae): implications for conservation
- (2013) Jinju Zhang et al. BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Use of an expressed sequence tag-based method for single nucleotide polymorphism identification and discrimination of Citrus species and cultivars
- (2013) Jamila Bernardi et al. MOLECULAR BREEDING
- Identification of chloroplast genome loci suitable for high-resolution phylogeographic studies ofColocasia esculenta(L.) Schott (Araceae) and closely related taxa
- (2013) Ibrar Ahmed et al. Molecular Ecology Resources
- Genome skimming reveals the origin of the Jerusalem Artichoke tuber crop species: neither from Jerusalem nor an artichoke
- (2013) Dan G. Bock et al. NEW PHYTOLOGIST
- Complete Chloroplast Genome of Sedum sarmentosum and Chloroplast Genome Evolution in Saxifragales
- (2013) Wenpan Dong et al. PLoS One
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- Genetic diversity in Eucommia ulmoides (Eucommiaceae), an endangered traditional Chinese medicinal plant
- (2012) Xiaohong Yao et al. CONSERVATION GENETICS
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- How important are transposons for plant evolution?
- (2012) Damon Lisch NATURE REVIEWS GENETICS
- Construction and analysis of EST libraries of the trans-polyisoprene producing plant, Eucommia ulmoides Oliver
- (2012) Nobuaki Suzuki et al. PLANTA
- MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
- (2012) Fredrik Ronquist et al. SYSTEMATIC BIOLOGY
- Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics
- (2011) Shannon C. K. Straub et al. AMERICAN JOURNAL OF BOTANY
- Plant diversity and conservation in China: planning a strategic bioresource for a sustainable future
- (2011) HONGWEN HUANG BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- Discovery and mapping of a new expressed sequence tag-single nucleotide polymorphism and simple sequence repeat panel for large-scale genetic studies and breeding of Theobroma cacao L.
- (2011) M. Allegre et al. DNA RESEARCH
- The evolution of the plastid chromosome in land plants: gene content, gene order, gene function
- (2011) Susann Wicke et al. PLANT MOLECULAR BIOLOGY
- A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
- (2011) Robert J. Elshire et al. PLoS One
- SNPs Occur in Regions with Less Genomic Sequence Conservation
- (2011) John C. Castle PLoS One
- High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)
- (2011) Yun-Jie Zhang et al. PLoS One
- Localized hypermutation and associated gene losses in legume chloroplast genomes
- (2010) A. M. Magee et al. GENOME RESEARCH
- An uncorrelated relaxed-clock analysis suggests an earlier origin for flowering plants
- (2010) S. A. Smith et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Episodic Evolution and Adaptation of Chloroplast Genomes in Ancestral Grasses
- (2009) Bojian Zhong et al. PLoS One
- Eastern Asian endemic seed plant genera and their paleogeographic history throughout the Northern Hemisphere
- (2009) Steven R. MANCHESTER et al. Journal of Systematics and Evolution
- Genome-wide analyses of Geraniaceae plastid DNA reveal unprecedented patterns of increased nucleotide substitutions
- (2008) M. M. Guisinger et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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