标题
Regulation of alternative mRNA splicing: old players and new perspectives
作者
关键词
-
出版物
FEBS LETTERS
Volume -, Issue -, Pages -
出版商
Wiley
发表日期
2018-06-02
DOI
10.1002/1873-3468.13119
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Ess2 bridges transcriptional regulators and spliceosomal complexes via distinct interacting domains
- (2018) Ichiro Takada et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Structure and Conformational Dynamics of the Human Spliceosomal B act Complex
- (2018) David Haselbach et al. CELL
- RNA G-quadruplex secondary structure promotes alternative splicing via the RNA-binding protein hnRNPF
- (2017) Huilin Huang et al. GENES & DEVELOPMENT
- Co-expression networks reveal the tissue-specific regulation of transcription and splicing
- (2017) Ashis Saha et al. GENOME RESEARCH
- RBM25 is a global splicing factor promoting inclusion of alternatively spliced exons and is itself regulated by lysine mono-methylation
- (2017) Scott M. Carlson et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Methodologies for studying the spliceosome’s RNA dynamics with single-molecule FRET
- (2017) Clarisse van der Feltz et al. METHODS
- Single-Cell Alternative Splicing Analysis with Expedition Reveals Splicing Dynamics during Neuron Differentiation
- (2017) Yan Song et al. MOLECULAR CELL
- Multilayered Control of Alternative Splicing Regulatory Networks by Transcription Factors
- (2017) Hong Han et al. MOLECULAR CELL
- Mechanistic insights into precursor messenger RNA splicing by the spliceosome
- (2017) Yigong Shi NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Ensembl 2018
- (2017) Daniel R Zerbino et al. NUCLEIC ACIDS RESEARCH
- Variant snRNPs: New players within the spliceosome system
- (2017) Pilar Vazquez-Arango et al. RNA Biology
- Intron retention is regulated by altered MeCP2-mediated splicing factor recruitment
- (2017) Justin J. -L. Wong et al. Nature Communications
- Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing
- (2016) Xinping Yang et al. CELL
- Spliceosomal DEAH-Box ATPases Remodel Pre-mRNA to Activate Alternative Splice Sites
- (2016) Daniel R. Semlow et al. CELL
- SR proteins are NXF1 adaptors that link alternative RNA processing to mRNA export
- (2016) Michaela Müller-McNicoll et al. GENES & DEVELOPMENT
- Resources for the Comprehensive Discovery of Functional RNA Elements
- (2016) Balaji Sundararaman et al. MOLECULAR CELL
- RNA-sequencing of a mouse-model of spinal muscular atrophy reveals tissue-wide changes in splicing of U12-dependent introns
- (2016) Thomas Koed Doktor et al. NUCLEIC ACIDS RESEARCH
- Variant U1 snRNAs are implicated in human pluripotent stem cell maintenance and neuromuscular disease
- (2016) Pilar Vazquez-Arango et al. NUCLEIC ACIDS RESEARCH
- Cutting a Long Intron Short: Recursive Splicing and Its Implications
- (2016) Theodore Georgomanolis et al. Frontiers in Physiology
- Mammalian NET-Seq Reveals Genome-wide Nascent Transcription Coupled to RNA Processing
- (2015) Takayuki Nojima et al. CELL
- Genome-Wide Identification of Fas/CD95 Alternative Splicing Regulators Reveals Links with Iron Homeostasis
- (2015) J. Ramón Tejedor et al. MOLECULAR CELL
- Functional Splicing Network Reveals Extensive Regulatory Potential of the Core Spliceosomal Machinery
- (2015) Panagiotis Papasaikas et al. MOLECULAR CELL
- Exon-intron circular RNAs regulate transcription in the nucleus
- (2015) Zhaoyong Li et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Splicing of many human genes involves sites embedded within introns
- (2015) Steven Kelly et al. NUCLEIC ACIDS RESEARCH
- The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms
- (2015) Rubén Gustavo Schlaen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Aberrant splicing of U12-type introns is the hallmark of ZRSR2 mutant myelodysplastic syndrome
- (2015) Vikas Madan et al. Nature Communications
- Compound heterozygous mutations in the noncoding RNU4ATAC cause Roifman Syndrome by disrupting minor intron splicing
- (2015) Daniele Merico et al. Nature Communications
- Epigenetic and transcriptional determinants of the human breast
- (2015) Philippe Gascard et al. Nature Communications
- Exon-intron circular RNAs regulate transcription in the nucleus
- (2015) Zhaoyong Li et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- SF3B1 Association with Chromatin Determines Splicing Outcomes
- (2015) Nir Kfir et al. Cell Reports
- HP1 Is Involved in Regulating the Global Impact of DNA Methylation on Alternative Splicing
- (2015) Ahuvi Yearim et al. Cell Reports
- A Function for the hnRNP A1/A2 Proteins in Transcription Elongation
- (2015) Bruno Lemieux et al. PLoS One
- Minor splicing snRNAs are enriched in the developing mouse CNS and are crucial for survival of differentiating retinal neurons
- (2014) Marybeth Baumgartner et al. Developmental Neurobiology
- Pre-mRNA splicing is facilitated by an optimal RNA polymerase II elongation rate
- (2014) Nova Fong et al. GENES & DEVELOPMENT
- BS69/ZMYND11 Reads and Connects Histone H3.3 Lysine 36 Trimethylation-Decorated Chromatin to Regulated Pre-mRNA Processing
- (2014) Rui Guo et al. MOLECULAR CELL
- circRNA Biogenesis Competes with Pre-mRNA Splicing
- (2014) Reut Ashwal-Fluss et al. MOLECULAR CELL
- ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression
- (2014) Hong Wen et al. NATURE
- Context-dependent control of alternative splicing by RNA-binding proteins
- (2014) Xiang-Dong Fu et al. NATURE REVIEWS GENETICS
- A day in the life of the spliceosome
- (2014) A. Gregory Matera et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Identification by high-throughput imaging of the histone methyltransferase EHMT2 as an epigenetic regulator of VEGFA alternative splicing
- (2014) Maayan Salton et al. NUCLEIC ACIDS RESEARCH
- Transcriptome analysis of alternative splicing events regulated by SRSF10 reveals position-dependent splicing modulation
- (2014) Xuexia Zhou et al. NUCLEIC ACIDS RESEARCH
- Developmental Analysis of Spliceosomal snRNA Isoform Expression
- (2014) Zhipeng Lu et al. G3-Genes Genomes Genetics
- SR Proteins Collaborate with 7SK and Promoter-Associated Nascent RNA to Release Paused Polymerase
- (2013) Xiong Ji et al. CELL
- Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition
- (2013) Alika K Maunakea et al. CELL RESEARCH
- Regulation of splicing by SR proteins and SR protein-specific kinases
- (2013) Zhihong Zhou et al. CHROMOSOMA
- Integrative transcriptome sequencing identifies trans-splicing events with important roles in human embryonic stem cell pluripotency
- (2013) C.-S. Wu et al. GENOME RESEARCH
- From single-cell to cell-pool transcriptomes: Stochasticity in gene expression and RNA splicing
- (2013) G. K. Marinov et al. GENOME RESEARCH
- Decreased number of Gemini of coiled bodies and U12 snRNA level in amyotrophic lateral sclerosis
- (2013) Tomohiko Ishihara et al. HUMAN MOLECULAR GENETICS
- Competition between Pre-mRNAs for the Splicing Machinery Drives Global Regulation of Splicing
- (2013) Elizabeth M. Munding et al. MOLECULAR CELL
- Genome-wide Analysis Reveals SR Protein Cooperation and Competition in Regulated Splicing
- (2013) Shatakshi Pandit et al. MOLECULAR CELL
- Natural RNA circles function as efficient microRNA sponges
- (2013) Thomas B. Hansen et al. NATURE
- Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges
- (2013) Michael T Lovci et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Quaking and PTB control overlapping splicing regulatory networks during muscle cell differentiation
- (2013) M. P. Hall et al. RNA
- Live-Cell Visualization of Pre-mRNA Splicing with Single-Molecule Sensitivity
- (2013) Robert M. Martin et al. Cell Reports
- Transcriptome-wide Regulation of Pre-mRNA Splicing and mRNA Localization by Muscleblind Proteins
- (2012) Eric T. Wang et al. CELL
- Mutation of a U2 snRNA Gene Causes Global Disruption of Alternative Splicing and Neurodegeneration
- (2012) Yichang Jia et al. CELL
- Spliceosome integrity is defective in the motor neuron diseases ALS and SMA
- (2012) Hitomi Tsuiji et al. EMBO Molecular Medicine
- Widespread recognition of 5' splice sites by noncanonical base-pairing to U1 snRNA involving bulged nucleotides
- (2012) X. Roca et al. GENES & DEVELOPMENT
- The RNA polymerase II CTD coordinates transcription and RNA processing
- (2012) J.-P. Hsin et al. GENES & DEVELOPMENT
- Differentially expressed, variant U1 snRNAs regulate gene expression in human cells
- (2012) D. O'Reilly et al. GENOME RESEARCH
- Tissue-Specific Alternative Splicing Remodels Protein-Protein Interaction Networks
- (2012) Jonathan D. Ellis et al. MOLECULAR CELL
- Muscleblind-like 2-Mediated Alternative Splicing in the Developing Brain and Dysregulation in Myotonic Dystrophy
- (2012) Konstantinos Charizanis et al. NEURON
- Circular RNAs Are the Predominant Transcript Isoform from Hundreds of Human Genes in Diverse Cell Types
- (2012) Julia Salzman et al. PLoS One
- Staying on message: ensuring fidelity in pre-mRNA splicing
- (2012) Daniel R. Semlow et al. TRENDS IN BIOCHEMICAL SCIENCES
- New connections between splicing and human disease
- (2012) Richard A. Padgett TRENDS IN GENETICS
- Integrative Genome-wide Analysis Reveals Cooperative Regulation of Alternative Splicing by hnRNP Proteins
- (2012) Stephanie C. Huelga et al. Cell Reports
- Psip1/Ledgf p52 Binds Methylated Histone H3K36 and Splicing Factors and Contributes to the Regulation of Alternative Splicing
- (2012) Madapura M. Pradeepa et al. PLoS Genetics
- The significant other: splicing by the minor spliceosome
- (2012) Janne J. Turunen et al. Wiley Interdisciplinary Reviews-RNA
- Exon and intron definition in pre-mRNA splicing
- (2012) Laura De Conti et al. Wiley Interdisciplinary Reviews-RNA
- Regulation of alternative splicing by the core spliceosomal machinery
- (2011) A. L. Saltzman et al. GENES & DEVELOPMENT
- The RNA polymerase II C-terminal domain promotes splicing activation through recruitment of a U2AF65-Prp19 complex
- (2011) C. J. David et al. GENES & DEVELOPMENT
- Cell-to-cell variability of alternative RNA splicing
- (2011) Z. Waks et al. Molecular Systems Biology
- CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing
- (2011) Sanjeev Shukla et al. NATURE
- Functional consequences of developmentally regulated alternative splicing
- (2011) Auinash Kalsotra et al. NATURE REVIEWS GENETICS
- Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons
- (2011) Violaine Saint-André et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36
- (2011) Sérgio Fernandes de Almeida et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Compensatory signals associated with the activation of human GC 5′ splice sites
- (2011) Jana Kralovicova et al. NUCLEIC ACIDS RESEARCH
- Histone Deacetylase Activity Modulates Alternative Splicing
- (2011) Jarmila Hnilicová et al. PLoS One
- Hu proteins regulate alternative splicing by inducing localized histone hyperacetylation in an RNA-dependent manner
- (2011) H.-L. Zhou et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Association of TALS Developmental Disorder with Defect in Minor Splicing Component U4atac snRNA
- (2011) P. Edery et al. SCIENCE
- Ordered and Dynamic Assembly of Single Spliceosomes
- (2011) A. A. Hoskins et al. SCIENCE
- Mutations in U4atac snRNA, a Component of the Minor Spliceosome, in the Developmental Disorder MOPD I
- (2011) H. He et al. SCIENCE
- Functional diversity of the hnRNPs: past, present and perspectives
- (2010) Siew Ping Han et al. BIOCHEMICAL JOURNAL
- The DEAH Box ATPases Prp16 and Prp43 Cooperate to Proofread 5′ Splice Site Cleavage during Pre-mRNA Splicing
- (2010) Prakash Koodathingal et al. MOLECULAR CELL
- Deciphering the splicing code
- (2010) Yoseph Barash et al. NATURE
- Relationship between nucleosome positioning and DNA methylation
- (2010) Ramakrishna K. Chodavarapu et al. NATURE
- Analysis and design of RNA sequencing experiments for identifying isoform regulation
- (2010) Yarden Katz et al. NATURE METHODS
- DEAH-box ATPase Prp16 has dual roles in remodeling of the spliceosome in catalytic steps
- (2010) C.-K. Tseng et al. RNA
- Regulation of Alternative Splicing by Histone Modifications
- (2010) R. F. Luco et al. SCIENCE
- The Spliceosome: Design Principles of a Dynamic RNP Machine
- (2009) Markus C. Wahl et al. CELL
- ESRP1 and ESRP2 Are Epithelial Cell-Type-Specific Regulators of FGFR2 Splicing
- (2009) Claude C. Warzecha et al. MOLECULAR CELL
- Biased Chromatin Signatures around Polyadenylation Sites and Exons
- (2009) Noah Spies et al. MOLECULAR CELL
- Genome-wide Analysis of PTB-RNA Interactions Reveals a Strategy Used by the General Splicing Repressor to Modulate Exon Inclusion or Skipping
- (2009) Yuanchao Xue et al. MOLECULAR CELL
- Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches
- (2009) Mo Chen et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Nucleosome positioning as a determinant of exon recognition
- (2009) Hagen Tilgner et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Chromatin organization marks exon-intron structure
- (2009) Schraga Schwartz et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The protein factors MBNL1 and U2AF65 bind alternative RNA structures to regulate splicing
- (2009) M. B. Warf et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nucleosomal Fluctuations Govern the Transcription Dynamics of RNA Polymerase II
- (2009) C. Hodges et al. SCIENCE
- Role of RNA structure in regulating pre-mRNA splicing
- (2009) M. Bryan Warf et al. TRENDS IN BIOCHEMICAL SCIENCES
- The SR protein family of splicing factors: master regulators of gene expression
- (2008) Jennifer C. Long et al. BIOCHEMICAL JOURNAL
- SMN Deficiency Causes Tissue-Specific Perturbations in the Repertoire of snRNAs and Widespread Defects in Splicing
- (2008) Zhenxi Zhang et al. CELL
- Dynamic Regulation of Alternative Splicing by Silencers that Modulate 5′ Splice Site Competition
- (2008) Yang Yu et al. CELL
- Alternative isoform regulation in human tissue transcriptomes
- (2008) Eric T. Wang et al. NATURE
- Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
- (2008) Qun Pan et al. NATURE GENETICS
- Phosphorylation switches the general splicing repressor SRp38 to a sequence-specific activator
- (2008) Ying Feng et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Polypyrimidine tract binding protein controls the transition from exon definition to an intron defined spliceosome
- (2008) Shalini Sharma et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Tissue-specific splicing factor gene expression signatures
- (2008) Ana Rita Grosso et al. NUCLEIC ACIDS RESEARCH
- Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
- (2008) Z. Wang et al. RNA
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now