Learning Microbial Community Structures with Supervised and Unsupervised Non-negative Matrix Factorization
出版年份 2017 全文链接
标题
Learning Microbial Community Structures with Supervised and Unsupervised Non-negative Matrix Factorization
作者
关键词
Microbial communities, Subcommunities, Metagenomics, Non-negative Matrix factorization
出版物
Microbiome
Volume 5, Issue 1, Pages -
出版商
Springer Nature
发表日期
2017-08-31
DOI
10.1186/s40168-017-0323-1
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- BioMiCo: a supervised Bayesian model for inference of microbial community structure
- (2015) Mahdi Shafiei et al. Microbiome
- The oral microbiome and the immunobiology of periodontal disease and caries
- (2014) Massimo Costalonga et al. IMMUNOLOGY LETTERS
- BiomeNet: A Bayesian Model for Inference of Metabolic Divergence among Microbial Communities
- (2014) Mahdi Shafiei et al. PLoS Computational Biology
- Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
- (2014) Paul J. McMurdie et al. PLoS Computational Biology
- Deciphering microbial interactions and detecting keystone species with co-occurrence networks
- (2014) David Berry et al. Frontiers in Microbiology
- Polycyclic Aromatic Hydrocarbons and Digestive Tract Cancers: A Perspective
- (2013) Deacqunita L. Diggs et al. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH PART C-ENVIRONMENTAL CARCINOGENESIS & ECOTOXICOLOGY REVIEWS
- Porphyromonas gingivalis as a Potential Community Activist for Disease
- (2012) R.P. Darveau et al. JOURNAL OF DENTAL RESEARCH
- Dirichlet Multinomial Mixtures: Generative Models for Microbial Metagenomics
- (2012) Ian Holmes et al. PLoS One
- Functional Biogeography of Ocean Microbes Revealed through Non-Negative Matrix Factorization
- (2012) Xingpeng Jiang et al. PLoS One
- Development of non-antibiotic macrolide that corrects inflammation-driven immune dysfunction in models of inflammatory bowel diseases and arthritis
- (2011) Andrea Mencarelli et al. EUROPEAN JOURNAL OF PHARMACOLOGY
- Defining seasonal marine microbial community dynamics
- (2011) Jack A Gilbert et al. ISME Journal
- A non-negative matrix factorization framework for identifying modular patterns in metagenomic profile data
- (2011) Xingpeng Jiang et al. JOURNAL OF MATHEMATICAL BIOLOGY
- Microbial metabolic exchange—the chemotype-to-phenotype link
- (2011) Vanessa V Phelan et al. Nature Chemical Biology
- Bayesian community-wide culture-independent microbial source tracking
- (2011) Dan Knights et al. NATURE METHODS
- Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans
- (2011) B. D. Muegge et al. SCIENCE
- Moving pictures of the human microbiome
- (2011) J Gregory Caporaso et al. GENOME BIOLOGY
- A flexible R package for nonnegative matrix factorization
- (2010) Renaud Gaujoux et al. BMC BIOINFORMATICS
- Role of the gut microbiota in defining human health
- (2010) Kei E Fujimura et al. Expert Review of Anti-Infective Therapy
- UniFrac: an effective distance metric for microbial community comparison
- (2010) Catherine Lozupone et al. ISME Journal
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Gut Microbiota in Health and Disease
- (2010) Inna Sekirov et al. PHYSIOLOGICAL REVIEWS
- Macrolide antibiotics as immunomodulatory medications: Proposed mechanisms of action
- (2008) Masaharu Shinkai et al. PHARMACOLOGY & THERAPEUTICS
- Nonnegative Matrix Factorization: An Analytical and Interpretive Tool in Computational Biology
- (2008) Karthik Devarajan PLoS Computational Biology
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now