Gut Microbiota in Health and Disease

Molecular Studies of Fecal Anaerobic Commensal Bacteria in Acute Diarrhea in Children

(2010) Ramadass Balamurugan et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

The effects of selected probiotic strains on the development of eczema (the PandA study)

(2009) L. Niers et al.   ALLERGY

High-Throughput Quantitative Analysis of the Human Intestinal Microbiota with a Phylogenetic Microarray

(2009) O. Paliy et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Conjugated linoleic acid isomers: Differences in metabolism and biological effects

(2009) Itziar Churruca et al.   BIOFACTORS

Molecular Characterization of Akebia Plants and the Derived Traditional Herbal Medicine

(2009) Fumiyo Kitaoka et al.   BIOLOGICAL & PHARMACEUTICAL BULLETIN

Management of the human mucosal defensive barrier: evidence for glycan legislation

(2009) Georgios Patsos et al.   BIOLOGICAL CHEMISTRY

BacteroidesInduce Higher IgA Production ThanLactobacillusby Increasing Activation-Induced Cytidine Deaminase Expression in B Cells in Murine Peyer’s Patches

(2009) Tsutomu YANAGIBASHI et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Parallel metatranscriptome analyses of host and symbiont gene expression in the gut of the termite Reticulitermes flavipes

(2009) Aurélien Tartar et al.   Biotechnology for Biofuels

Altered early infant gut microbiota in children developing allergy up to 5 years of age

(2009) Y. M. Sjögren et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Clinical impact of antibiotic-resistant Gram-positive pathogens

(2009) H.M. Lode   CLINICAL MICROBIOLOGY AND INFECTION

Gastrointestinal tract in liver disease: which organ is sick?

(2009) Kristina Norman et al.   CURRENT OPINION IN CLINICAL NUTRITION AND METABOLIC CARE

Alterations in intestinal microbial flora and human disease

(2009) Mohamed Othman et al.   CURRENT OPINION IN GASTROENTEROLOGY

Gastrointestinal microbiology enters the metagenomics era

(2009) Daniel N Frank et al.   CURRENT OPINION IN GASTROENTEROLOGY

Nutrition and colonic health: the critical role of the microbiota

(2009) Stephen JD OʼKeefe   CURRENT OPINION IN GASTROENTEROLOGY

Commensal bacteria, traditional and opportunistic pathogens, dysbiosis and bacterial killing in inflammatory bowel diseases

(2009) Christopher D Packey et al.   CURRENT OPINION IN INFECTIOUS DISEASES

Adaptation of protein expression byEscherichia coliin the gastrointestinal tract of gnotobiotic mice

(2009) Carl Alpert et al.   ENVIRONMENTAL MICROBIOLOGY

Influence of antibiotic exposure in the early postnatal period on the development of intestinal microbiota

(2009) Shigemitsu Tanaka et al.   FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY

Gastroprotective and blood pressure lowering effects of dietary nitrate are abolished by an antiseptic mouthwash

(2009) Joel Petersson et al.   FREE RADICAL BIOLOGY AND MEDICINE

The Relationship Between Intestinal Microbiota and the Central Nervous System in Normal Gastrointestinal Function and Disease

(2009) Stephen M. Collins et al.   GASTROENTEROLOGY

Postinfectious Irritable Bowel Syndrome

(2009) Robin Spiller et al.   GASTROENTEROLOGY

Prolonged Impact of Antibiotics on Intestinal Microbial Ecology and Susceptibility to Enteric Salmonella Infection

(2009) A. Croswell et al.   INFECTION AND IMMUNITY

Perturbation of the Small Intestine Microbial Ecology by Streptomycin Alters Pathology in a Salmonella enterica Serovar Typhimurium Murine Model of Infection

(2009) C. D. Garner et al.   INFECTION AND IMMUNITY

Community-Wide Response of the Gut Microbiota to Enteropathogenic Citrobacter rodentium Infection Revealed by Deep Sequencing

(2009) C. Hoffmann et al.   INFECTION AND IMMUNITY

Antibiotic Treatment of Clostridium difficile Carrier Mice Triggers a Supershedder State, Spore-Mediated Transmission, and Severe Disease in Immunocompromised Hosts

(2009) T. D. Lawley et al.   INFECTION AND IMMUNITY

Reproducible Community Dynamics of the Gastrointestinal Microbiota following Antibiotic Perturbation

(2009) D. A. Antonopoulos et al.   INFECTION AND IMMUNITY

Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice

(2009) Chenhong Zhang et al.   ISME Journal

Antibiotic use and intussusception in early childhood

(2009) A. Hviid et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Populations of heavy fuel oil-degrading marine microbial community in presence of oil sorbent materials

(2009) C. Gertler et al.   JOURNAL OF APPLIED MICROBIOLOGY

The role of the intestinal microbiota in enteric infection

(2009) Inna Sekirov et al.   JOURNAL OF PHYSIOLOGY-LONDON

Charles River altered Schaedler flora (CRASF®) remained stable for four years in a mouse colony housed in individually ventilated cages

(2009) Matthias Stehr et al.   LABORATORY ANIMALS

The role of gut hormones in the regulation of body weight and energy homeostasis

(2009) Efthimia Karra et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Gut microbiome modulates the toxicity of hydrazine: a metabonomic study

(2009) Jonathan Swann et al.   Molecular BioSystems

Regulatory mechanisms of immune responses to intestinal bacteria

(2009) K Honda et al.   Mucosal Immunology

Principles and clinical implications of the brain–gut–enteric microbiota axis

(2009) Sang H. Rhee et al.   Nature Reviews Gastroenterology & Hepatology

Do symbiotic bacteria subvert host immunity?

(2009) Lora V. Hooper   NATURE REVIEWS MICROBIOLOGY

Modulation of the Intestinal Microbiota Alters Colitis-Associated Colorectal Cancer Susceptibility

(2009) Joshua M. Uronis et al.   PLoS One

Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites

(2009) W. R. Wikoff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla

(2009) M. A. Mahowald et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The two-component system QseEF and the membrane protein QseG link adrenergic and stress sensing to bacterial pathogenesis

(2009) N. C. Reading et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation

(2009) P. A. Crawford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prolonged impact of a one-week course of clindamycin on Enterococcus spp. in human normal microbiota

(2009) Marianne Lindgren et al.   SCANDINAVIAN JOURNAL OF INFECTIOUS DISEASES

Disturbance of the gut-associated lymphoid tissue is associated with disease progression in chronic HIV infection

(2009) Ursula Hofer et al.   Seminars in Immunopathology

Lower Bifidobacteria counts in both duodenal mucosa-associated and fecal microbiota in irritable bowel syndrome patients

(2009) Angèle PM Kerckhoffs et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Effect of Molecules Secreted by Lactobacillus acidophilus Strain La-5 on Escherichia coli O157:H7 Colonization

(2008) M. J. Medellin-Pena et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gut microbiota and lipopolysaccharide content of the diet influence development of regulatory T cells: studies in germ-free mice

(2008) Tomas Hrncir et al.   BMC IMMUNOLOGY

Microflora of bile aspirates in patients with acute cholecystitis With or without cholelithiasis: a tropical experience

(2008) Malini R. Capoor et al.   Brazilian Journal of Infectious Diseases

Enterococcus faecalis Induces Aneuploidy and Tetraploidy in Colonic Epithelial Cells through a Bystander Effect

(2008) X. Wang et al.   CANCER RESEARCH

Mucosal Glycan Foraging Enhances Fitness and Transmission of a Saccharolytic Human Gut Bacterial Symbiont

(2008) Eric C. Martens et al.   Cell Host & Microbe

Metagenomic Approaches for Defining the Pathogenesis of Inflammatory Bowel Diseases

(2008) Daniel A. Peterson et al.   Cell Host & Microbe

Diet-Induced Obesity Is Linked to Marked but Reversible Alterations in the Mouse Distal Gut Microbiome

(2008) Peter J. Turnbaugh et al.   Cell Host & Microbe

Specific Microbiota Direct the Differentiation of IL-17-Producing T-Helper Cells in the Mucosa of the Small Intestine

(2008) Ivaylo I. Ivanov et al.   Cell Host & Microbe

Commensals, Bacterial Pathogens and Intestinal Inflammation: An Intriguing Ménage à Trois

(2008) Thierry Pédron et al.   Cell Host & Microbe

Motility allows S. Typhimurium to benefit from the mucosal defence

(2008) Bärbel Stecher et al.   CELLULAR MICROBIOLOGY

Antibiotic use in the first year of life and risk of atopic disease in early childhood

(2008) M. M. H. Kusel et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Effect of intestinal microbiota on the induction of regulatory CD25CD4T cells

(2008) H. Ishikawa et al.   CLINICAL AND EXPERIMENTAL IMMUNOLOGY

The Role of Microbiota and Probiotics in Stress-Induced Gastrointestinal Damage

(2008) Femke Lutgendorff et al.   CURRENT MOLECULAR MEDICINE

Changes in Gut Microbiota Control Metabolic Endotoxemia-Induced Inflammation in High-Fat Diet-Induced Obesity and Diabetes in Mice

(2008) P. D. Cani et al.   DIABETES

Culture-independent analysis of the gut microbiota in colorectal cancer and polyposis

(2008) Pauline D. Scanlan et al.   ENVIRONMENTAL MICROBIOLOGY

New subgroup of Bacteroidetes and diverse microorganisms in Tibetan plateau glacial ice provide a biological record of environmental conditions

(2008) Xiaojun Zhang et al.   FEMS MICROBIOLOGY ECOLOGY

Antibiotic-associated diarrhea: epidemiology, trends and treatment

(2008) Lynne V McFarland   Future Microbiology

Microbial Influences in Inflammatory Bowel Diseases

(2008) R. Balfour Sartor   GASTROENTEROLOGY

Microbes in Gastrointestinal Health and Disease

(2008) Andrew S. Neish   GASTROENTEROLOGY

Secreted enteric antimicrobial activity localises to the mucus surface layer

(2008) U Meyer-Hoffert et al.   GUT

Human Microbiota-Secreted Factors Inhibit Shiga Toxin Synthesis by Enterohemorrhagic Escherichia coli O157:H7

(2008) T. de Sablet et al.   INFECTION AND IMMUNITY

Antibiotic-Induced Perturbations of the Intestinal Microbiota Alter Host Susceptibility to Enteric Infection

(2008) I. Sekirov et al.   INFECTION AND IMMUNITY

Twin studies reveal specific imbalances in the mucosa-associated microbiota of patients with ileal Crohnʼs disease

(2008) Ben Willing et al.   INFLAMMATORY BOWEL DISEASES

Allergic Sensitization to Bovine β-Lactoglobulin: Comparison between Germ-Free and Conventional BALB/c Mice

(2008) S. Hazebrouck et al.   INTERNATIONAL ARCHIVES OF ALLERGY AND IMMUNOLOGY

Shotgun metaproteomics of the human distal gut microbiota

(2008) Nathan C Verberkmoes et al.   ISME Journal

A Longitudinal Analysis on the Association Between Antibiotic Use, Intestinal Microflora, and Wheezing During the First Year of Life

(2008) Stijn L. Verhulst et al.   JOURNAL OF ASTHMA

Decreased Diversity of the Fecal Microbiome in RecurrentClostridium difficile–Associated Diarrhea

(2008) Ju Young Chang et al.   JOURNAL OF INFECTIOUS DISEASES

Biliary lipids and cholesterol gallstone disease

(2008) David Q-H. Wang et al.   JOURNAL OF LIPID RESEARCH

Impact of antibiotics on the gut microbiota of critically ill patients

(2008) G. Iapichino et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Metabonomic and Microbiological Analysis of the Dynamic Effect of Vancomycin-Induced Gut Microbiota Modification in the Mouse

(2008) Ivan K. S. Yap et al.   JOURNAL OF PROTEOME RESEARCH

Towards high-throughput metabolomics using ultrahigh-field Fourier transform ion cyclotron resonance mass spectrometry

(2008) Jun Han et al.   Metabolomics

Effect of Antibiotic Therapy on Human Fecal Microbiota and the Relation to the Development of Clostridium difficile

(2008) M. F. De La Cochetière et al.   MICROBIAL ECOLOGY

PU.1 and bacterial metabolites regulate the human gene CAMP encoding antimicrobial peptide LL-37 in colon epithelial cells

(2008) Stefan Termén et al.   MOLECULAR IMMUNOLOGY

Innate immune recognition of the indigenous microbial flora

(2008) S Rakoff-Nahoum et al.   Mucosal Immunology

A microbial symbiosis factor prevents intestinal inflammatory disease

(2008) Sarkis K. Mazmanian et al.   NATURE

Lymphoid tissue genesis induced by commensals through NOD1 regulates intestinal homeostasis

(2008) Djahida Bouskra et al.   NATURE

Vancomycin-resistant enterococci exploit antibiotic-induced innate immune deficits

(2008) Katharina Brandl et al.   NATURE

ATP drives lamina propria TH17 cell differentiation

(2008) Koji Atarashi et al.   NATURE

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE

Innate immunity and intestinal microbiota in the development of Type 1 diabetes

(2008) Li Wen et al.   NATURE

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

(2008) Micah Hamady et al.   NATURE METHODS

Autoantibodies against appetite-regulating peptide hormones and neuropeptides: Putative modulation by gut microflora

(2008) Sergueï O. Fetissov et al.   NUTRITION

Emerging role of autoantibodies against appetite-regulating neuropeptides in eating disorders

(2008) Sergueï O. Fetissov et al.   NUTRITION

Anti-Inflammatory Implications of the Microbial Transformation of Dietary Phenolic Compounds

(2008) Wendy R. Russell et al.   NUTRITION AND CANCER-AN INTERNATIONAL JOURNAL

Randomized, Double-Blind, Placebo-Controlled Trial of Probiotics for Primary Prevention: No Clinical Effects of Lactobacillus GG Supplementation

(2008) M. V. Kopp et al.   PEDIATRICS

Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome

(2008) Tim Urich et al.   PLoS One

Elevated Systemic Antibodies towards Commensal Gut Microbiota in Autoinflammatory Condition

(2008) Gayane P. Manukyan et al.   PLoS One

Intestinal Bacteria Condition Dendritic Cells to Promote IgA Production

(2008) Joanna C. Massacand et al.   PLoS One

Predominant Role of Host Genetics in Controlling the Composition of Gut Microbiota

(2008) Zaruhi A. Khachatryan et al.   PLoS One

Helicobacter pylori evolution during progression from chronic atrophic gastritis to gastric cancer and its impact on gastric stem cells

(2008) M. Giannakis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Paneth cells directly sense gut commensals and maintain homeostasis at the intestinal host-microbial interface

(2008) S. Vaishnava et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial community gene expression in ocean surface waters

(2008) J. Frias-Lopez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Commensal microbiota is fundamental for the development of inflammatory pain

(2008) F. A. Amaral et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients

(2008) H. Sokol et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of the gut microbiota on host adiposity are modulated by the short-chain fatty-acid binding G protein-coupled receptor, Gpr41

(2008) B. S. Samuel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The inner of the two Muc2 mucin-dependent mucus layers in colon is devoid of bacteria

(2008) M. E. V. Johansson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Symbiotic gut microbes modulate human metabolic phenotypes

(2008) M. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Increased prescription rate of antibiotics prior to non-typhoid Salmonella infections: A one-year nested case-control study

(2008) Kim O. Gradel et al.   SCANDINAVIAN JOURNAL OF INFECTIOUS DISEASES

Modulation of Gene Expression via Disruption of NF- B Signaling by a Bacterial Small Molecule

(2008) V. V. Kravchenko et al.   SCIENCE

Dynamic interactions between bacteria and immune cells leading to intestinal IgA synthesis

(2008) Masayuki Tsuji et al.   SEMINARS IN IMMUNOLOGY

The role of microbiota in infectious disease

(2008) Bärbel Stecher et al.   TRENDS IN MICROBIOLOGY

The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing

(2008) Les Dethlefsen et al.   PLOS BIOLOGY

Commensal-Induced Regulatory T Cells Mediate Protection against Pathogen-Stimulated NF-κB Activation

(2008) Caitlin O'Mahony et al.   PLoS Pathogens

The Effect of a Multispecies Probiotic on the Intestinal Microbiota and Bowel Movements in Healthy Volunteers Taking the Antibiotic Amoxycillin

(2007) Catherina JM Koning et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Therapy and epidemiology of autism–clostridial spores as key elements

(2007) Sydney M. Finegold   MEDICAL HYPOTHESES